RNA–Protein interactions for RNA: ENST00000393062.6

SPIRE2-202, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE2, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-202ENST00000393062 CHCHD1Q96BP2 118 aaKnown RBP16.19■□□□□ 0.18
SPIRE2-202ENST00000393062 IGKV3D-20A0A0C4DH25 116 aa16.18■□□□□ 0.18
SPIRE2-202ENST00000393062 IGHV4-31P0DP07 118 aa16.18■□□□□ 0.18
SPIRE2-202ENST00000393062 CTRLP40313 264 aa16.18■□□□□ 0.18
SPIRE2-202ENST00000393062 PRSS57Q6UWY2 283 aa16.18■□□□□ 0.18
SPIRE2-202ENST00000393062 TLN2Q9Y4G6 2542 aa16.18■□□□□ 0.18
SPIRE2-202ENST00000393062 D6R8Y8 96 aa16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 FAM104BQ5XKR9 115 aa16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 MRPL53Q96EL3 112 aaKnown RBP16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 C20orf144Q9BQM9 153 aa16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 A0A0G2JLM5 398 aa16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 J3QLI3 93 aa16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 RPS20P60866 119 aaKnown RBP16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 RPL11P62913 178 aaKnown RBP16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 C9orf47Q6ZRZ4 202 aa16.17■□□□□ 0.18
SPIRE2-202ENST00000393062 BTF3P20290 206 aaKnown RBP16.16■□□□□ 0.18
SPIRE2-202ENST00000393062 FOXE3Q13461 319 aa16.16■□□□□ 0.18
SPIRE2-202ENST00000393062 LINC01559Q495D7 138 aa16.16■□□□□ 0.18
SPIRE2-202ENST00000393062 SOCS3O14543 225 aa16.16■□□□□ 0.18
SPIRE2-202ENST00000393062 PSMB8P28062 276 aa16.16■□□□□ 0.18
SPIRE2-202ENST00000393062 FAM106AQ4KMX7 169 aa16.16■□□□□ 0.18
SPIRE2-202ENST00000393062 ZNF738Q8NE65 137 aa16.16■□□□□ 0.18
SPIRE2-202ENST00000393062 SMKR1H3BMG3 65 aa16.15■□□□□ 0.18
SPIRE2-202ENST00000393062 SRD5A1P18405 259 aa16.15■□□□□ 0.18
SPIRE2-202ENST00000393062 SRSF2Q01130 221 aaKnown RBP16.15■□□□□ 0.18
SPIRE2-202ENST00000393062 MRPL51Q4U2R6 128 aaKnown RBP16.15■□□□□ 0.18
SPIRE2-202ENST00000393062 PRR9Q5T870 116 aa16.15■□□□□ 0.18
SPIRE2-202ENST00000393062 RHPN1-AS1Q9BWJ2 59 aa16.15■□□□□ 0.18
SPIRE2-202ENST00000393062 J3KRW8 73 aa16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 EREGO14944 169 aa16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 ZNF705AQ6ZN79 300 aaPredicted RBP16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 C9orf139Q6ZV77 190 aa16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 TIMM8BQ9Y5J9 83 aaPredicted RBP16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 LOC389332A0A1B0GUA5 103 aa16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 SPATA45Q537H7 98 aa16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 Q96MF0 132 aa16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 PEF1Q9UBV8 284 aaKnown RBP16.14■□□□□ 0.17
SPIRE2-202ENST00000393062 LEPROTL1O95214 131 aa16.13■□□□□ 0.17
SPIRE2-202ENST00000393062 IFI27P40305 119 aaPredicted RBP16.13■□□□□ 0.17
SPIRE2-202ENST00000393062 PRRC2AP48634 2157 aaKnown RBP16.13■□□□□ 0.17
SPIRE2-202ENST00000393062 IGHV7-4-1A0A0J9YVY3 117 aa16.13■□□□□ 0.17
SPIRE2-202ENST00000393062 F6UB75 175 aa16.13■□□□□ 0.17
SPIRE2-202ENST00000393062 MIEN1Q9BRT3 115 aa16.13■□□□□ 0.17
SPIRE2-202ENST00000393062 U3KQK5 164 aa16.13■□□□□ 0.17
SPIRE2-202ENST00000393062 FSHBP01225 129 aa16.12■□□□□ 0.17
SPIRE2-202ENST00000393062 PRELID3AQ96N28 172 aa16.12■□□□□ 0.17
SPIRE2-202ENST00000393062 SNHG12Q9BXW3 62 aa16.12■□□□□ 0.17
SPIRE2-202ENST00000393062 GAS8-AS1O95177 125 aa16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 NCR2O95944 276 aa16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 PRSS3P2Q8NHM4 247 aa16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 TMEM70Q9BUB7 260 aa16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 MCRIP2Q9BUT9 160 aaKnown RBP16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 DAZ1Q9NQZ3 744 aaKnown RBP16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 RPLP1P05386 114 aaKnown RBP16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 HIST1H1AQ02539 215 aaPredicted RBP16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 CNFNQ9BYD5 112 aa16.11■□□□□ 0.17
SPIRE2-202ENST00000393062 AKAP9Q99996 3911 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 A0A1B0GV90 55 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 ORMDL3Q8N138 153 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 AP5S1Q9NUS5 200 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 SIGLEC8Q9NYZ4 499 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 CUBNO60494 3623 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 ITPR3Q14573 2671 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 Q6YL49 198 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 RNF185Q96GF1 192 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 PPP1R14DQ9NXH3 145 aa16.1■□□□□ 0.17
SPIRE2-202ENST00000393062 DUX5Q96PT3 197 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 TMEM191AQ9H0A3 160 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 SMPXQ9UHP9 88 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 VPREB3Q9UKI3 123 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 SYS1-DBNDD2H3BUS1 97 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 HOXA3O43365 443 aaPredicted RBP16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 CKS2P33552 79 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 FXYD7P58549 80 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 OR10AG1Q8NH19 301 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 ZNF580Q9UK33 172 aa16.09■□□□□ 0.17
SPIRE2-202ENST00000393062 NPYP01303 97 aa16.08■□□□□ 0.16
SPIRE2-202ENST00000393062 RAB4AP20338 218 aa16.08■□□□□ 0.16
SPIRE2-202ENST00000393062 KIR3DS1Q14943 382 aa16.08■□□□□ 0.16
SPIRE2-202ENST00000393062 FA2HQ7L5A8 372 aa16.08■□□□□ 0.16
SPIRE2-202ENST00000393062 MYO9AB2RTY4 2548 aa16.08■□□□□ 0.16
SPIRE2-202ENST00000393062 CCDC168Q8NDH2 2452 aa16.08■□□□□ 0.16
SPIRE2-202ENST00000393062 SONP18583 2426 aaKnown RBP16.08■□□□□ 0.16
SPIRE2-202ENST00000393062 H0Y8G0 127 aa16.07■□□□□ 0.16
SPIRE2-202ENST00000393062 CRXO43186 299 aaPredicted RBP16.07■□□□□ 0.16
SPIRE2-202ENST00000393062 ZFAND2AQ8N6M9 145 aa16.07■□□□□ 0.16
SPIRE2-202ENST00000393062 A0A096LNJ9 63 aa16.07■□□□□ 0.16
SPIRE2-202ENST00000393062 OR10J6PQ8NGY7 276 aa16.06■□□□□ 0.16
SPIRE2-202ENST00000393062 C2orf88Q9BSF0 95 aa16.06■□□□□ 0.16
SPIRE2-202ENST00000393062 SPRY2O43597 315 aa16.06■□□□□ 0.16
SPIRE2-202ENST00000393062 OR5AL1P0C617 328 aa16.06■□□□□ 0.16
SPIRE2-202ENST00000393062 IGLC3P0DOY3 106 aa16.06■□□□□ 0.16
SPIRE2-202ENST00000393062 WFDC3Q8IUB2 231 aa16.06■□□□□ 0.16
SPIRE2-202ENST00000393062 LINC00477Q96M19 166 aa16.06■□□□□ 0.16
SPIRE2-202ENST00000393062 ZNF702PQ9H963 129 aa16.06■□□□□ 0.16
SPIRE2-202ENST00000393062 EVI2AP22794 236 aa16.05■□□□□ 0.16
SPIRE2-202ENST00000393062 OVOL1O14753 267 aa16.04■□□□□ 0.16
SPIRE2-202ENST00000393062 GATA1P15976 413 aaPredicted RBP16.04■□□□□ 0.16
SPIRE2-202ENST00000393062 WFDC11Q8NEX6 87 aa16.04■□□□□ 0.16
SPIRE2-202ENST00000393062 SORL1Q92673 2214 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms