RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CLDND2Q8NHS1 167 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 CCL4L1Q8NHW4 92 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 C10orf105Q8TEF2 133 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF714Q96N38 554 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 HIST1H2BLQ99880 126 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 UPK3BQ9BT76 320 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 TTTY13Q9BZ97 58 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 DPH3P1Q9H4G8 78 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 ASF1BQ9NVP2 202 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 UQCR10Q9UDW1 63 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 OR5V1Q9UGF6 321 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 HHLA3Q9XRX5 114 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 TPRKBQ9Y3C4 175 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 KIF20BQ96Q89 1820 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 COL1A1P02452 1464 aaPredicted RBP1.09□□□□□ -2.24
TRAV40-201ENST00000390467 MAGI2Q86UL8 1455 aa1.09□□□□□ -2.24
TRAV40-201ENST00000390467 ARHGAP5Q13017 1502 aa1.09□□□□□ -2.24
TRAV40-201ENST00000390467 DLC1Q96QB1 1528 aa1.09□□□□□ -2.24
TRAV40-201ENST00000390467 ARAP2Q8WZ64 1704 aa1.09□□□□□ -2.24
TRAV40-201ENST00000390467 MED1Q15648 1581 aaPredicted RBP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 KIAA1549Q9HCM3 1950 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 SIPA1L1O43166 1804 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 NUP98P52948 1817 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 ABCC5O15440 1437 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 CRB1P82279 1406 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 CASKIN1Q8WXD9 1431 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 FYCO1Q9BQS8 1478 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 TRAV1-1A0A0B4J248 108 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 FAM24AA6NFZ4 105 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 A8MWP4 228 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 ZNF736B4DX44 427 aaPredicted RBP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 J3QKU1 62 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 J3QRE1 110 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 K7ERS5 55 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 LECT2O14960 151 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 SSSCA1O60232 199 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 YPEL1O60688 119 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 HYPMO75409 117 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 PROSCO94903 275 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 UBL3O95164 117 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 CYB5AP00167 134 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 IGLV6-57P01721 117 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 IGHV1-69P01742 117 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 GYPAP02724 150 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 SHBGP04278 402 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 COX6A1P12074 109 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 PTHLHP12272 177 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 FABP4P15090 132 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 FUSP35637 526 aaKnown RBP eCLIP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 ASIPP42127 132 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 PCBD1P61457 104 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 NPC2P61916 151 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 LSM3P62310 102 aaKnown RBP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 DYNLT1P63172 113 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 CDK5R1Q15078 307 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 KIAA2026Q5HYC2 2103 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 ZNF322Q6U7Q0 402 aaPredicted RBP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 MED12LQ86YW9 2145 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 SBSPONQ8IVN8 264 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 OR5AS1Q8N127 324 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 SIGLECL1Q8N7X8 197 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 CNEP1R1Q8N9A8 125 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 LINC00301Q8NCQ3 95 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 KLF14Q8TD94 323 aaPredicted RBP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 ZNF431Q8TF32 576 aaPredicted RBP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 POP5Q969H6 163 aaKnown RBP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 SCGB3A1Q96QR1 104 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 DSCR8Q96T75 97 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 NABP2Q9BQ15 211 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 C20orf78Q9BR46 151 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 MYH1P12882 1939 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 SPHKAPQ2M3C7 1700 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 LRRIQ1Q96JM4 1722 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 ABCA3Q99758 1704 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 BAZ2BQ9UIF8 2168 aaKnown RBP1.08□□□□□ -2.24
TRAV40-201ENST00000390467 ABCC3O15438 1527 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 LMTK2Q8IWU2 1503 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 THADAQ6YHU6 1953 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 SBF2Q86WG5 1849 aa1.08□□□□□ -2.24
TRAV40-201ENST00000390467 RIMBP3CA6NJZ7 1639 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 RIMBP3BA6NNM3 1639 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 RIMBP3Q9UFD9 1639 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 ANK1P16157 1881 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 DOCK1Q14185 1865 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 MYO5AQ9Y4I1 1855 aaKnown RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 MALRD1Q5VYJ5 2156 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 PLEKHH2Q8IVE3 1493 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 ARHGEF28Q8N1W1 1705 aaKnown RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 PTPRBP23467 1997 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 KIAA0100Q14667 2235 aaKnown RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 IGHV1-3A0A0C4DH29 117 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 C19orf71A6NCJ1 209 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 A6NED7 52 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 E7EQL1 145 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 H3BRM9 83 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 SDCBPO00560 298 aaPredicted RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 GNGT2O14610 69 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 SLC25A20O43772 301 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 TIMM17BO60830 172 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 SH2D1AO60880 128 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms