RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 MRPL36Q9P0J6 103 aaKnown RBP12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 TRAV8-2A0A0B4J237 113 aa12.7□□□□□ -0.38
PTPRN2-201ENST00000389413 TMEM262E9PQX1 116 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 NDUFA4O00483 81 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 HLA-DMBP28068 263 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 OR13C6PQ8NH95 151 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 GRNP28799 593 aaKnown RBP12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 ZNF503Q96F45 646 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 TOMM7Q9P0U1 55 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 TRAV26-2A0A0B4J265 109 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 NDUFS7O75251 213 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 IGHV4-39P01824 125 aa12.69□□□□□ -0.38
PTPRN2-201ENST00000389413 BRCA2P51587 3418 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 IGLV1-47P01700 117 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 NPBQ8NG41 125 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 PF4P02776 101 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 EMP1P54849 157 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 DYNAPQ8N1N2 210 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 DLX4Q92988 240 aaPredicted RBP12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 PGPEP1Q9NXJ5 209 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 LAMA2P24043 3122 aaKnown RBP12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 IGHV3-73A0A0B4J1V6 119 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 MSMBP08118 114 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 GTSF1Q8WW33 167 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 LINC00574Q9H8X3 128 aa12.68□□□□□ -0.38
PTPRN2-201ENST00000389413 MRPL35Q9NZE8 188 aaKnown RBP12.67□□□□□ -0.38
PTPRN2-201ENST00000389413 IGLV11-55A0A075B6I3 123 aa12.67□□□□□ -0.38
PTPRN2-201ENST00000389413 SMIM2Q9BVW6 85 aa12.67□□□□□ -0.38
PTPRN2-201ENST00000389413 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
PTPRN2-201ENST00000389413 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 TEX22C9J3V5 150 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 ANXA2RQ3ZCQ2 193 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 LRP4O75096 1905 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 NBL1P41271 181 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 UTF1Q5T230 341 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 TP53TG1Q9Y2A0 90 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 HOXB4P17483 251 aaPredicted RBP12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 ZNF415Q09FC8 603 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 LINC00173Q6ZV60 143 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 DKK2Q9UBU2 259 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 SIVA1O15304 175 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 CRYGCP07315 174 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 SYNJ2BPP57105 145 aa12.66□□□□□ -0.38
PTPRN2-201ENST00000389413 PAX2Q02962 417 aa12.65□□□□□ -0.38
PTPRN2-201ENST00000389413 RBAKDNA6NC62 111 aa12.65□□□□□ -0.38
PTPRN2-201ENST00000389413 SLC25A16P16260 332 aa12.65□□□□□ -0.38
PTPRN2-201ENST00000389413 DAZAP2Q15038 168 aaPredicted RBP12.64□□□□□ -0.39
PTPRN2-201ENST00000389413 ADAMTSL5Q6ZMM2 481 aa12.64□□□□□ -0.39
PTPRN2-201ENST00000389413 IGFBPL1Q8WX77 278 aa12.64□□□□□ -0.39
PTPRN2-201ENST00000389413 C1orf229Q6ZS94 237 aaPredicted RBP12.64□□□□□ -0.39
PTPRN2-201ENST00000389413 TRPT1Q86TN4 253 aaKnown RBP12.64□□□□□ -0.39
PTPRN2-201ENST00000389413 GATA3P23771 443 aa12.64□□□□□ -0.39
PTPRN2-201ENST00000389413 LINC01356Q8N9X3 169 aa12.64□□□□□ -0.39
PTPRN2-201ENST00000389413 IGKV1D-37A0A075B6S9 117 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 IGHV7-81A0A0B4J1V7 117 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 F8VRH5 84 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 Q6ZVH6 145 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 LAMA3Q16787 3333 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 MKI67P46013 3256 aaKnown RBP12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 CTSGP08311 255 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 MRPL53Q96EL3 112 aaKnown RBP12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 CEP192Q8TEP8 1941 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 M0R2P5 195 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 LINC01545Q5VT33 79 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 C11orf44Q8N8P7 122 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 TMEM141Q96I45 108 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 DEFB125Q8N687 156 aa12.63□□□□□ -0.39
PTPRN2-201ENST00000389413 IGLV2-8P01709 118 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 PMVKQ15126 192 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 CFHR4Q92496 578 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 MYMXA0A1B0GTQ4 84 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 K7EP34 96 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 HLA-DRB4P13762 266 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 HLA-DRB4X5D2U9 266 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 TRBV7-9A0A0J9YWB2 115 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 SDHAF1A6NFY7 115 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 TSPAN13O95857 204 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 C20orf78Q9BR46 151 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 A0A0U1RRA0 63 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 K7EP13 123 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 LENEPQ9Y5L5 61 aa12.62□□□□□ -0.39
PTPRN2-201ENST00000389413 WI2-2373I1.2A0A1W2PRP0 233 aa12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 MORN3Q6PF18 240 aaPredicted RBP12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 DYSFO75923 2080 aa12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 RNASE1P07998 156 aaKnown RBP12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 C19orf71A6NCJ1 209 aa12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 SCGB1A1P11684 91 aa12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 SPINK13Q1W4C9 94 aa12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 MUC6Q6W4X9 2439 aa12.61□□□□□ -0.39
PTPRN2-201ENST00000389413 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 RPL36AP83881 106 aaKnown RBP12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 RPL36ALQ969Q0 106 aaKnown RBP12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 DEFB131AP59861 70 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 TIMM21Q9BVV7 248 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 A0A1W2PPM0 123 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 ADARB2-AS1A8MUL3 147 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms