RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 A0A0G2JMZ2 1700 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 LRRC37A2A6NM11 1700 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 B3GALT5-AS1P59052 145 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 A0A087WW49 117 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 DENND4AQ7Z401 1863 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 GATA3P23771 443 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 FOXE3Q13461 319 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 ZNF124Q15973 351 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 GTSF1Q8WW33 167 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 RNF5Q99942 180 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 RNF138Q8WVD3 245 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 CAMK2N2Q96S95 79 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 CCL18P55774 89 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 CARD19Q96LW7 228 aa12.98□□□□□ -0.33
RGP1-201ENST00000378078 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
RGP1-201ENST00000378078 IGHV4-38-2P0DP08 117 aa12.97□□□□□ -0.33
RGP1-201ENST00000378078 C8orf31Q8N9H6 132 aa12.97□□□□□ -0.33
RGP1-201ENST00000378078 Q6ZRM9 215 aa12.97□□□□□ -0.33
RGP1-201ENST00000378078 TMEM141Q96I45 108 aa12.97□□□□□ -0.33
RGP1-201ENST00000378078 TNRC6BQ9UPQ9 1833 aaKnown RBP12.97□□□□□ -0.33
RGP1-201ENST00000378078 KLF2Q9Y5W3 355 aaPredicted RBP12.97□□□□□ -0.33
RGP1-201ENST00000378078 COX7B2Q8TF08 81 aa12.96□□□□□ -0.33
RGP1-201ENST00000378078 RBM3P98179 157 aaKnown RBP12.96□□□□□ -0.33
RGP1-201ENST00000378078 TM2D2Q9BX73 214 aa12.96□□□□□ -0.34
RGP1-201ENST00000378078 TRAV4A0A0B4J268 109 aa12.96□□□□□ -0.34
RGP1-201ENST00000378078 CEP250Q9BV73 2442 aa12.95□□□□□ -0.34
RGP1-201ENST00000378078 J3QRE1 110 aa12.95□□□□□ -0.34
RGP1-201ENST00000378078 RHODO00212 210 aa12.95□□□□□ -0.34
RGP1-201ENST00000378078 C9orf66Q5T8R8 295 aa12.95□□□□□ -0.34
RGP1-201ENST00000378078 AMTNQ6UX39 209 aa12.95□□□□□ -0.34
RGP1-201ENST00000378078 CYTL1Q9NRR1 136 aa12.95□□□□□ -0.34
RGP1-201ENST00000378078 IGHV7-4-1A0A0J9YVY3 117 aa12.94□□□□□ -0.34
RGP1-201ENST00000378078 NMSQ5H8A3 153 aa12.94□□□□□ -0.34
RGP1-201ENST00000378078 CRYBA4P53673 196 aa12.94□□□□□ -0.34
RGP1-201ENST00000378078 C17orf58Q2M2W7 97 aa12.94□□□□□ -0.34
RGP1-201ENST00000378078 LYPD1Q8N2G4 141 aa12.94□□□□□ -0.34
RGP1-201ENST00000378078 ZC2HC1AQ96GY0 325 aa12.94□□□□□ -0.34
RGP1-201ENST00000378078 COL6A6A6NMZ7 2263 aa12.94□□□□□ -0.34
RGP1-201ENST00000378078 A8MWP6 167 aa12.93□□□□□ -0.34
RGP1-201ENST00000378078 Q8N8P6 123 aa12.93□□□□□ -0.34
RGP1-201ENST00000378078 PRSS46E5RG02 174 aa12.93□□□□□ -0.34
RGP1-201ENST00000378078 NDUFA4O00483 81 aa12.93□□□□□ -0.34
RGP1-201ENST00000378078 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
RGP1-201ENST00000378078 DEFB113Q30KQ7 82 aa12.93□□□□□ -0.34
RGP1-201ENST00000378078 DAND5Q8N907 189 aa12.93□□□□□ -0.34
RGP1-201ENST00000378078 TMEM14EPQ6UXP3 125 aa12.93□□□□□ -0.34
RGP1-201ENST00000378078 K7EM74 188 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 ICOSQ9Y6W8 199 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 IGHV4-30-2A0A087WSY4 118 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 H0Y9J4 135 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 MPZP25189 248 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 DEFB135Q30KP9 77 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 Q9H8V8 135 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 TMEM14BQ9NUH8 114 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 FBLN5Q9UBX5 448 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 ELANEP08246 267 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 WDR90Q96KV7 1748 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 A0A096LNI7 61 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 ZNF503-AS2A6NEH8 195 aa12.92□□□□□ -0.34
RGP1-201ENST00000378078 IGHG2P01859 326 aa12.91□□□□□ -0.34
RGP1-201ENST00000378078 TRAV13-2A0A0B4J235 113 aa12.91□□□□□ -0.34
RGP1-201ENST00000378078 SPRNQ5BIV9 151 aa12.91□□□□□ -0.34
RGP1-201ENST00000378078 ZNF833PQ6ZTB9 187 aa12.91□□□□□ -0.34
RGP1-201ENST00000378078 CACNA1GO43497 2377 aa12.91□□□□□ -0.34
RGP1-201ENST00000378078 HERVK_113P63121 156 aa12.9□□□□□ -0.34
RGP1-201ENST00000378078 RHOHQ15669 191 aa12.9□□□□□ -0.34
RGP1-201ENST00000378078 ZDBF2Q9HCK1 2354 aa12.9□□□□□ -0.34
RGP1-201ENST00000378078 TRBV19A0A075B6N1 114 aa12.9□□□□□ -0.34
RGP1-201ENST00000378078 ORMDL1Q9P0S3 153 aa12.9□□□□□ -0.34
RGP1-201ENST00000378078 IGKV2-24A0A0C4DH68 120 aa12.9□□□□□ -0.34
RGP1-201ENST00000378078 PRSS33Q8NF86 280 aa12.9□□□□□ -0.34
RGP1-201ENST00000378078 MRPL35Q9NZE8 188 aaKnown RBP12.9□□□□□ -0.34
RGP1-201ENST00000378078 NDUFA4L2Q9NRX3 87 aa12.9□□□□□ -0.34
RGP1-201ENST00000378078 CEND1Q8N111 149 aa12.9□□□□□ -0.35
RGP1-201ENST00000378078 Q6ZR03 302 aa12.89□□□□□ -0.35
RGP1-201ENST00000378078 DKK2Q9UBU2 259 aa12.89□□□□□ -0.35
RGP1-201ENST00000378078 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
RGP1-201ENST00000378078 NPYP01303 97 aa12.89□□□□□ -0.35
RGP1-201ENST00000378078 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
RGP1-201ENST00000378078 RPL39LQ96EH5 51 aaKnown RBP12.89□□□□□ -0.35
RGP1-201ENST00000378078 ZSWIM8A7E2V4 1837 aa12.89□□□□□ -0.35
RGP1-201ENST00000378078 A0A1B0GW64 132 aa12.89□□□□□ -0.35
RGP1-201ENST00000378078 FNDC1Q4ZHG4 1894 aaPredicted RBP12.88□□□□□ -0.35
RGP1-201ENST00000378078 IGLV3-9A0A075B6K5 115 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 DYNAPQ8N1N2 210 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 SIGLEC8Q9NYZ4 499 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 J3QLI3 93 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 IFITM1P13164 125 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 IGKV3D-7A0A0C4DH55 119 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 SLAQ13239 276 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 C1orf194Q5T5A4 169 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 SVIPQ8NHG7 77 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 KIAA1671Q9BY89 1806 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
RGP1-201ENST00000378078 COLCA2A8K830 154 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 H3BRN7 92 aa12.88□□□□□ -0.35
RGP1-201ENST00000378078 ADAMTS9Q9P2N4 1935 aa12.87□□□□□ -0.35
RGP1-201ENST00000378078 GPHB5Q86YW7 130 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms