RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 IGKV3-20P01619 116 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 IGF1P05019 195 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 MGPP08493 103 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 UBE2E1P51965 193 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 PCP2Q8IVA1 136 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 CRYBG3Q68DQ2 2970 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 WNK1Q9H4A3 2382 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 TRBV12-3P01733 135 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 ZNF502Q8TBZ5 544 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 RNASE8Q8TDE3 154 aaKnown RBP9.99□□□□□ -0.81
USP11-204ENST00000377107 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 SIRPDQ9H106 197 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 SCRT2Q9NQ03 307 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 F6UB75 175 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 CCDC140Q96MF4 163 aa9.99□□□□□ -0.81
USP11-204ENST00000377107 TNFRSF6BO95407 300 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 S100A7P31151 101 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 ARL3P36405 182 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 HIST1H1AQ02539 215 aaPredicted RBP9.98□□□□□ -0.81
USP11-204ENST00000377107 LINC01545Q5VT33 79 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 C8orf86Q6ZUL3 223 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
USP11-204ENST00000377107 GCSHP23434 173 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 RPS20P60866 119 aaKnown RBP9.98□□□□□ -0.81
USP11-204ENST00000377107 TMEM158Q8WZ71 300 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 TRAV41A0A0B4J266 112 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 FBLL1A6NHQ2 334 aaKnown RBP9.98□□□□□ -0.81
USP11-204ENST00000377107 PAX2Q02962 417 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 GTSCR1Q86UQ5 136 aa9.98□□□□□ -0.81
USP11-204ENST00000377107 IGHG4P01861 327 aa9.97□□□□□ -0.81
USP11-204ENST00000377107 PAX8Q06710 450 aa9.97□□□□□ -0.81
USP11-204ENST00000377107 DTX2Q86UW9 622 aa9.97□□□□□ -0.81
USP11-204ENST00000377107 VPS25Q9BRG1 176 aa9.97□□□□□ -0.81
USP11-204ENST00000377107 TRAV8-6A0A0B4J262 113 aa9.97□□□□□ -0.81
USP11-204ENST00000377107 CENPVL3A0A0U1RRI6 287 aa9.97□□□□□ -0.81
USP11-204ENST00000377107 CRXO43186 299 aaPredicted RBP9.97□□□□□ -0.81
USP11-204ENST00000377107 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
USP11-204ENST00000377107 A0A096LNJ9 63 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 H3BUT2 72 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 PCP4P48539 62 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 C11orf21Q9P2W6 132 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 A1L4Q6 167 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 TAX1BP3O14907 124 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 MAPK1IP1LQ8NDC0 245 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.81
USP11-204ENST00000377107 OOSP1A8MZH6 123 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 H3BUX3 64 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 COX8AP10176 69 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 ATP5J2P56134 94 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 UNQ9165/PRO28630Q6UXU0 137 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 Q8N6K4 173 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 NRGNQ92686 78 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 MS4A6AQ9H2W1 248 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 NAV2Q8IVL1 2488 aa9.96□□□□□ -0.82
USP11-204ENST00000377107 RNASE4P34096 147 aaKnown RBP9.95□□□□□ -0.82
USP11-204ENST00000377107 LMO4P61968 165 aa9.95□□□□□ -0.82
USP11-204ENST00000377107 IGKV3D-20A0A0C4DH25 116 aa9.95□□□□□ -0.82
USP11-204ENST00000377107 K7EP13 123 aa9.95□□□□□ -0.82
USP11-204ENST00000377107 BLCAPP62952 87 aa9.95□□□□□ -0.82
USP11-204ENST00000377107 IGHV4-38-2P0DP08 117 aa9.95□□□□□ -0.82
USP11-204ENST00000377107 C16orf54Q6UWD8 224 aa9.95□□□□□ -0.82
USP11-204ENST00000377107 UTP20O75691 2785 aaKnown RBP9.95□□□□□ -0.82
USP11-204ENST00000377107 KIR3DS1Q14943 382 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 IGHV4-61A0A0C4DH41 118 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 TRBV6-1A0A0K0K1D8 114 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 HTN1P15515 57 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 TMEM95Q3KNT9 176 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 C1orf122Q6ZSJ8 110 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 SLC50A1Q9BRV3 221 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 OVOL3O00110 214 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 IGHV4-39P01824 125 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 ZNF493Q6ZR52 646 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 C14orf178Q8N769 122 aaPredicted RBP9.94□□□□□ -0.82
USP11-204ENST00000377107 PPP1R14DQ9NXH3 145 aa9.94□□□□□ -0.82
USP11-204ENST00000377107 SMAD7O15105 426 aaKnown RBP9.93□□□□□ -0.82
USP11-204ENST00000377107 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
USP11-204ENST00000377107 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
USP11-204ENST00000377107 PHLDA3Q9Y5J5 127 aa9.93□□□□□ -0.82
USP11-204ENST00000377107 F5H697 171 aa9.93□□□□□ -0.82
USP11-204ENST00000377107 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
USP11-204ENST00000377107 CLPSL1A2RUU4 121 aa9.93□□□□□ -0.82
USP11-204ENST00000377107 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
USP11-204ENST00000377107 IGLC6P0CF74 106 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 SMIM17P0DL12 118 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 RAB9AP51151 201 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 Q6ZS46 218 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 C5orf56Q8N8D9 126 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 CCL19Q99731 98 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 MOB4Q9Y3A3 225 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 DEFB125Q8N687 156 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 OR2K2Q8NGT1 345 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 RNF185Q96GF1 192 aa9.92□□□□□ -0.82
USP11-204ENST00000377107 SCGB2A2Q13296 93 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 C2orf91Q6ZV80 131 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 EBI3Q14213 229 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 ITLN2Q8WWU7 325 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms