RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 IGLV1-40P01703 118 aa15.2■□□□□ 0.02
LHX3-202ENST00000371748 ERCC8Q13216 396 aa15.2■□□□□ 0.02
LHX3-202ENST00000371748 OR4X2Q8NGF9 303 aa15.2■□□□□ 0.02
LHX3-202ENST00000371748 SH2D1AO60880 128 aa15.2■□□□□ 0.02
LHX3-202ENST00000371748 SLC50A1Q9BRV3 221 aa15.2■□□□□ 0.02
LHX3-202ENST00000371748 ZNF138P52744 262 aa15.19■□□□□ 0.02
LHX3-202ENST00000371748 CFHR3Q02985 330 aa15.19■□□□□ 0.02
LHX3-202ENST00000371748 SAPCD1Q5SSQ6 148 aa15.19■□□□□ 0.02
LHX3-202ENST00000371748 TMSB15BA0A087X1C1 80 aa15.19■□□□□ 0.02
LHX3-202ENST00000371748 TRAV8-2A0A0B4J237 113 aa15.19■□□□□ 0.02
LHX3-202ENST00000371748 C8orf86Q6ZUL3 223 aa15.19■□□□□ 0.02
LHX3-202ENST00000371748 Q96MF0 132 aa15.19■□□□□ 0.02
LHX3-202ENST00000371748 APCP25054 2843 aa15.18■□□□□ 0.02
LHX3-202ENST00000371748 NDUFA4O00483 81 aa15.18■□□□□ 0.02
LHX3-202ENST00000371748 ZNF80P51504 273 aaPredicted RBP15.18■□□□□ 0.02
LHX3-202ENST00000371748 TPPP3Q9BW30 176 aa15.18■□□□□ 0.02
LHX3-202ENST00000371748 SMAD7O15105 426 aaKnown RBP15.18■□□□□ 0.02
LHX3-202ENST00000371748 ARMS2P0C7Q2 107 aa15.18■□□□□ 0.02
LHX3-202ENST00000371748 LRRC75A-AS1Q8N1F1 130 aa15.18■□□□□ 0.02
LHX3-202ENST00000371748 ZNF469Q96JG9 3925 aaPredicted RBP15.17■□□□□ 0.02
LHX3-202ENST00000371748 HAX1O00165 279 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 NUDT3O95989 172 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 SLC25A34Q6PIV7 304 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 MCRIP2Q9BUT9 160 aaKnown RBP15.17■□□□□ 0.02
LHX3-202ENST00000371748 TMEM191AQ9H0A3 160 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 DOPEY2Q9Y3R5 2298 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 FBLL1A6NHQ2 334 aaKnown RBP15.17■□□□□ 0.02
LHX3-202ENST00000371748 TAX1BP3O14907 124 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 OR5AL1P0C617 328 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 BVES-AS1Q5T3Y7 98 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 COX8CQ7Z4L0 72 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 GLMPQ8WWB7 406 aa15.17■□□□□ 0.02
LHX3-202ENST00000371748 TMEM189A5PLL7 270 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 FSHBP01225 129 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 C10orf99Q6UWK7 81 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 ERASQ7Z444 233 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 OR4C5Q8NGB2 326 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 SCRT2Q9NQ03 307 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 A0A0G2JLM5 398 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 A0A1B0GUT8 65 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 PET117Q6UWS5 81 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 MAP1LC3CQ9BXW4 147 aa15.16■□□□□ 0.02
LHX3-202ENST00000371748 TENM4Q6N022 2769 aa15.15■□□□□ 0.02
LHX3-202ENST00000371748 HIST2H2BCQ6DN03 193 aa15.15■□□□□ 0.02
LHX3-202ENST00000371748 TEX15Q9BXT5 2789 aa15.15■□□□□ 0.02
LHX3-202ENST00000371748 MXRA5Q9NR99 2828 aa15.15■□□□□ 0.02
LHX3-202ENST00000371748 VAMP3Q15836 100 aa15.14■□□□□ 0.01
LHX3-202ENST00000371748 PRRC2AP48634 2157 aaKnown RBP15.14■□□□□ 0.01
LHX3-202ENST00000371748 KRTAP1-3Q8IUG1 177 aa15.14■□□□□ 0.01
LHX3-202ENST00000371748 DEFB125Q8N687 156 aa15.14■□□□□ 0.01
LHX3-202ENST00000371748 C16orf92Q96LL3 132 aa15.14■□□□□ 0.01
LHX3-202ENST00000371748 NPFFR1Q9GZQ6 430 aa15.14■□□□□ 0.01
LHX3-202ENST00000371748 CREBBPQ92793 2442 aa15.14■□□□□ 0.01
LHX3-202ENST00000371748 CHD6Q8TD26 2715 aa15.14■□□□□ 0.01
LHX3-202ENST00000371748 MUC21A0A0G2JKD1 596 aa15.13■□□□□ 0.01
LHX3-202ENST00000371748 MUC21A0A140T8X8 626 aa15.13■□□□□ 0.01
LHX3-202ENST00000371748 HSBP1L1C9JCN9 74 aa15.13■□□□□ 0.01
LHX3-202ENST00000371748 CDKN1BP46527 198 aa15.13■□□□□ 0.01
LHX3-202ENST00000371748 MUC21Q5SSG8 566 aa15.13■□□□□ 0.01
LHX3-202ENST00000371748 IL17RELQ6ZVW7 336 aa15.13■□□□□ 0.01
LHX3-202ENST00000371748 RBAKDNA6NC62 111 aa15.13■□□□□ 0.01
LHX3-202ENST00000371748 VPREB3Q9UKI3 123 aa15.13■□□□□ 0.01
LHX3-202ENST00000371748 CSN3P07498 182 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 PSMB8P28062 276 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 RIGQ13278 110 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 LINC01545Q5VT33 79 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 AGPAT4-IT1Q9H0P7 198 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 HSPB8Q9UJY1 196 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 ZNF580Q9UK33 172 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 H0Y8G0 127 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 ANKRD39Q53RE8 183 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 LYZL1Q6UWQ5 148 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 C12orf54Q6X4T0 127 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 Q6YL49 198 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 PMCHL2Q9BQD1 86 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 SELENOKQ9Y6D0 94 aa15.12■□□□□ 0.01
LHX3-202ENST00000371748 BMI1P35226 326 aa15.11■□□□□ 0.01
LHX3-202ENST00000371748 TM4SF20Q53R12 229 aa15.11■□□□□ 0.01
LHX3-202ENST00000371748 Q6AWC8 147 aa15.11■□□□□ 0.01
LHX3-202ENST00000371748 GPHB5Q86YW7 130 aa15.11■□□□□ 0.01
LHX3-202ENST00000371748 MS4A6AQ9H2W1 248 aa15.11■□□□□ 0.01
LHX3-202ENST00000371748 C9orf139Q6ZV77 190 aa15.11■□□□□ 0.01
LHX3-202ENST00000371748 C20orf173Q96LM9 149 aa15.11■□□□□ 0.01
LHX3-202ENST00000371748 PEF1Q9UBV8 284 aaKnown RBP15.11■□□□□ 0.01
LHX3-202ENST00000371748 HOXA3O43365 443 aaPredicted RBP15.1■□□□□ 0.01
LHX3-202ENST00000371748 MRPL53Q96EL3 112 aaKnown RBP15.1■□□□□ 0.01
LHX3-202ENST00000371748 ORM1P02763 201 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 EDN2P20800 178 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 RPL11P62913 178 aaKnown RBP15.09■□□□□ 0.01
LHX3-202ENST00000371748 TMEM78Q5T7P6 136 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 AP5S1Q9NUS5 200 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 IGKV3-7A0A075B6H7 116 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 FABP5P3A8MUU1 101 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 ZNF575Q86XF7 245 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 GATD1Q8NB37 220 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 ZNF747Q9BV97 191 aa15.09■□□□□ 0.01
LHX3-202ENST00000371748 TIMM8BQ9Y5J9 83 aaPredicted RBP15.09■□□□□ 0.01
LHX3-202ENST00000371748 HIST1H1AQ02539 215 aaPredicted RBP15.08■□□□□ 0
LHX3-202ENST00000371748 FOXE3Q13461 319 aa15.08■□□□□ 0
LHX3-202ENST00000371748 RHPN1-AS1Q9BWJ2 59 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms