RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 GDF5OSQ5U4N7 250 aa11.28□□□□□ -0.6
NEK2-201ENST00000366998 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
NEK2-201ENST00000366998 OR9G4Q8NGQ1 327 aa11.28□□□□□ -0.6
NEK2-201ENST00000366998 WFDC12Q8WWY7 111 aa11.28□□□□□ -0.6
NEK2-201ENST00000366998 DLX4Q92988 240 aaPredicted RBP11.28□□□□□ -0.6
NEK2-201ENST00000366998 PPP1R14DQ9NXH3 145 aa11.28□□□□□ -0.6
NEK2-201ENST00000366998 GRIFINA4D1Z8 144 aa11.27□□□□□ -0.6
NEK2-201ENST00000366998 ZNF688P0C7X2 276 aa11.27□□□□□ -0.6
NEK2-201ENST00000366998 RPS20P60866 119 aaKnown RBP11.27□□□□□ -0.6
NEK2-201ENST00000366998 ADAMTSL5Q6ZMM2 481 aa11.27□□□□□ -0.6
NEK2-201ENST00000366998 LENEPQ9Y5L5 61 aa11.27□□□□□ -0.6
NEK2-201ENST00000366998 J3KRW8 73 aa11.27□□□□□ -0.61
NEK2-201ENST00000366998 S100A2P29034 98 aa11.27□□□□□ -0.61
NEK2-201ENST00000366998 FOXA3P55318 350 aaPredicted RBP11.27□□□□□ -0.61
NEK2-201ENST00000366998 Q6AWC8 147 aa11.27□□□□□ -0.61
NEK2-201ENST00000366998 HIST3H2BBQ8N257 126 aa11.27□□□□□ -0.61
NEK2-201ENST00000366998 BORCS7Q96B45 105 aa11.27□□□□□ -0.61
NEK2-201ENST00000366998 RAX2Q96IS3 184 aa11.27□□□□□ -0.61
NEK2-201ENST00000366998 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.61
NEK2-201ENST00000366998 SSBP4Q9BWG4 385 aaPredicted RBP11.27□□□□□ -0.61
NEK2-201ENST00000366998 RNF114Q9Y508 228 aa11.27□□□□□ -0.61
NEK2-201ENST00000366998 TSSC4Q9Y5U2 329 aaPredicted RBP11.27□□□□□ -0.61
NEK2-201ENST00000366998 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
NEK2-201ENST00000366998 K7EQG2 157 aa11.26□□□□□ -0.61
NEK2-201ENST00000366998 NDUFA7O95182 113 aa11.26□□□□□ -0.61
NEK2-201ENST00000366998 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
NEK2-201ENST00000366998 CRISP2P16562 243 aa11.26□□□□□ -0.61
NEK2-201ENST00000366998 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
NEK2-201ENST00000366998 PAFAH1B2P68402 229 aa11.26□□□□□ -0.61
NEK2-201ENST00000366998 SLAQ13239 276 aa11.26□□□□□ -0.61
NEK2-201ENST00000366998 PSMG4Q5JS54 123 aa11.26□□□□□ -0.61
NEK2-201ENST00000366998 FOSL1P15407 271 aa11.25□□□□□ -0.61
NEK2-201ENST00000366998 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
NEK2-201ENST00000366998 RIGQ13278 110 aa11.25□□□□□ -0.61
NEK2-201ENST00000366998 PRR31Q5SQ13 230 aa11.25□□□□□ -0.61
NEK2-201ENST00000366998 DYNLRB2Q8TF09 96 aa11.25□□□□□ -0.61
NEK2-201ENST00000366998 A0A1B0GUS0 222 aa11.25□□□□□ -0.61
NEK2-201ENST00000366998 COA6Q5JTJ3 125 aaKnown RBP11.25□□□□□ -0.61
NEK2-201ENST00000366998 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
NEK2-201ENST00000366998 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
NEK2-201ENST00000366998 CCL24O00175 119 aa11.24□□□□□ -0.61
NEK2-201ENST00000366998 TCF21O43680 179 aa11.24□□□□□ -0.61
NEK2-201ENST00000366998 SRIP30626 198 aa11.24□□□□□ -0.61
NEK2-201ENST00000366998 SSTP61278 116 aa11.24□□□□□ -0.61
NEK2-201ENST00000366998 LINC01559Q495D7 138 aa11.24□□□□□ -0.61
NEK2-201ENST00000366998 PRR9Q5T870 116 aa11.24□□□□□ -0.61
NEK2-201ENST00000366998 S100A8P05109 93 aa11.23□□□□□ -0.61
NEK2-201ENST00000366998 CSN3P07498 182 aa11.23□□□□□ -0.61
NEK2-201ENST00000366998 CD33P20138 364 aa11.23□□□□□ -0.61
NEK2-201ENST00000366998 ZFAND2AQ8N6M9 145 aa11.23□□□□□ -0.61
NEK2-201ENST00000366998 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
NEK2-201ENST00000366998 GPX1P07203 203 aa11.23□□□□□ -0.61
NEK2-201ENST00000366998 FABP4P15090 132 aa11.23□□□□□ -0.61
NEK2-201ENST00000366998 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
NEK2-201ENST00000366998 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
NEK2-201ENST00000366998 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
NEK2-201ENST00000366998 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
NEK2-201ENST00000366998 FHL3Q13643 280 aa11.22□□□□□ -0.61
NEK2-201ENST00000366998 MUC21Q5SSG8 566 aa11.22□□□□□ -0.61
NEK2-201ENST00000366998 Q6ZQT7 251 aa11.22□□□□□ -0.61
NEK2-201ENST00000366998 BAGE3Q86Y29 109 aa11.22□□□□□ -0.61
NEK2-201ENST00000366998 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
NEK2-201ENST00000366998 HIVEP1P15822 2718 aa11.22□□□□□ -0.61
NEK2-201ENST00000366998 IGKV3D-20A0A0C4DH25 116 aa11.21□□□□□ -0.61
NEK2-201ENST00000366998 A0A1B0GW15 77 aa11.21□□□□□ -0.61
NEK2-201ENST00000366998 RNASE4P34096 147 aaKnown RBP11.21□□□□□ -0.61
NEK2-201ENST00000366998 PROK1P58294 105 aa11.21□□□□□ -0.61
NEK2-201ENST00000366998 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
NEK2-201ENST00000366998 FAM19A4Q96LR4 140 aa11.21□□□□□ -0.61
NEK2-201ENST00000366998 NAGKQ9UJ70 344 aa11.21□□□□□ -0.61
NEK2-201ENST00000366998 WNK1Q9H4A3 2382 aa11.21□□□□□ -0.61
NEK2-201ENST00000366998 NSD1Q96L73 2696 aaPredicted RBP11.21□□□□□ -0.62
NEK2-201ENST00000366998 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.62
NEK2-201ENST00000366998 IGLC6P0CF74 106 aa11.21□□□□□ -0.62
NEK2-201ENST00000366998 CTRLP40313 264 aa11.21□□□□□ -0.62
NEK2-201ENST00000366998 TMEM61Q8N0U2 210 aa11.21□□□□□ -0.62
NEK2-201ENST00000366998 TRBV7-9A0A0J9YWB2 115 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 A0A0J9YX75 114 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 F2Z2F3 143 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 Q0VG73 95 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 NSUN5P1Q3KNT7 163 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 OR10D4PQ8NGN7 298 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 HIST1H2BLQ99880 126 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
NEK2-201ENST00000366998 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
NEK2-201ENST00000366998 IGKV3-20P01619 116 aa11.19□□□□□ -0.62
NEK2-201ENST00000366998 KIR3DS1Q14943 382 aa11.19□□□□□ -0.62
NEK2-201ENST00000366998 LINC00518Q8N0U6 118 aa11.19□□□□□ -0.62
NEK2-201ENST00000366998 SERF1AO75920 110 aa11.19□□□□□ -0.62
NEK2-201ENST00000366998 AMBPP02760 352 aa11.19□□□□□ -0.62
NEK2-201ENST00000366998 DEFB114Q30KQ6 69 aa11.19□□□□□ -0.62
NEK2-201ENST00000366998 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
NEK2-201ENST00000366998 AGRNO00468 2067 aa11.18□□□□□ -0.62
NEK2-201ENST00000366998 SORL1Q92673 2214 aa11.18□□□□□ -0.62
NEK2-201ENST00000366998 NUPR1O60356 82 aa11.18□□□□□ -0.62
NEK2-201ENST00000366998 CRLF1O75462 422 aa11.18□□□□□ -0.62
NEK2-201ENST00000366998 TWIST1Q15672 202 aa11.18□□□□□ -0.62
NEK2-201ENST00000366998 CD300EQ496F6 205 aaPredicted RBP11.18□□□□□ -0.62
NEK2-201ENST00000366998 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms