RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 MRPS12O15235 138 aaKnown RBP10.39□□□□□ -0.75
NCDN-201ENST00000356090 SMIM17P0DL12 118 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
NCDN-201ENST00000356090 DTX2Q86UW9 622 aa10.39□□□□□ -0.75
NCDN-201ENST00000356090 NOTCH3Q9UM47 2321 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 IGLV11-55A0A075B6I3 123 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 CCL21O00585 134 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 CFHR4Q92496 578 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 MRPL35Q9NZE8 188 aaKnown RBP10.38□□□□□ -0.75
NCDN-201ENST00000356090 DOPEY2Q9Y3R5 2298 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 IGHV3OR16-10A0A075B7F0 116 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 DPM2O94777 84 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 CTSGP08311 255 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 ZNF562Q6V9R5 426 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 H3BVH4 76 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 OVOL3O00110 214 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 AMTNQ6UX39 209 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 VMO1Q7Z5L0 202 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 Q8NA96 180 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 RNF5Q99942 180 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
NCDN-201ENST00000356090 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
NCDN-201ENST00000356090 SVEP1Q4LDE5 3571 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 G3V318 75 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 MGPP08493 103 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 ADAMTSL5Q6ZMM2 481 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 Q6ZQT7 251 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 NCOR2Q9Y618 2525 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 SORL1Q92673 2214 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 TRBV6-1A0A0K0K1D8 114 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 CSPG4Q6UVK1 2322 aa10.37□□□□□ -0.75
NCDN-201ENST00000356090 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
NCDN-201ENST00000356090 SMAD5-AS1Q9Y6J3 95 aa10.36□□□□□ -0.75
NCDN-201ENST00000356090 TEX48A0A1B0GUV7 120 aa10.36□□□□□ -0.75
NCDN-201ENST00000356090 SMAGPQ0VAQ4 97 aa10.36□□□□□ -0.75
NCDN-201ENST00000356090 ODF1Q14990 250 aa10.36□□□□□ -0.75
NCDN-201ENST00000356090 CCDC144NLQ6NUI1 221 aa10.36□□□□□ -0.75
NCDN-201ENST00000356090 ARL3P36405 182 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 C16orf92Q96LL3 132 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 LY6LH3BQJ8 138 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 OR5A1Q8NGJ0 315 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 GLMPQ8WWB7 406 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 RNF185Q96GF1 192 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 DEFB1P60022 68 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 SRSF8Q9BRL6 282 aaKnown RBP10.35□□□□□ -0.75
NCDN-201ENST00000356090 NPFFR1Q9GZQ6 430 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 U3KQK5 164 aa10.35□□□□□ -0.75
NCDN-201ENST00000356090 F8W735 103 aaPredicted RBP10.34□□□□□ -0.75
NCDN-201ENST00000356090 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
NCDN-201ENST00000356090 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
NCDN-201ENST00000356090 DCHS2Q6V1P9 2916 aa10.34□□□□□ -0.75
NCDN-201ENST00000356090 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
NCDN-201ENST00000356090 ZNF479Q96JC4 524 aa10.34□□□□□ -0.75
NCDN-201ENST00000356090 H3BMG7 143 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 TMEM219Q86XT9 240 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 ATP6V0E1O15342 81 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 PRTN3P24158 256 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 ETDBQ3ZM63 59 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 ZNF502Q8TBZ5 544 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 G3V4G9 280 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 EMP1P54849 157 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 LAGE3Q14657 143 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 TTC9CQ8N5M4 171 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 DPF1Q92782 380 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 METTL26Q96S19 204 aa10.33□□□□□ -0.76
NCDN-201ENST00000356090 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 ATP5LO75964 103 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 SH2D6Q7Z4S9 175 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 IGKV3D-20A0A0C4DH25 116 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 C11orf21Q9P2W6 132 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 OR11H12B2RN74 326 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
NCDN-201ENST00000356090 SIVA1O15304 175 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 WFDC2Q14508 124 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 MAPKAPK5-AS1Q8N8E1 139 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 NPBQ8NG41 125 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 OR11H1Q8NG94 326 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 OR11H2Q8NH07 326 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
NCDN-201ENST00000356090 CHD8Q9HCK8 2581 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 LINC01548A6NM66 108 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 SAMD13Q5VXD3 122 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 GATD1Q8NB37 220 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 OR11H6Q8NGC7 330 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 VKORC1Q9BQB6 163 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 LOC107984156A0A0G2JMH3 177 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 TGFAP01135 160 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 IGHG4P01861 327 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 SRSF9Q13242 221 aaKnown RBP eCLIP10.31□□□□□ -0.76
NCDN-201ENST00000356090 ARL17AQ8IVW1 177 aa10.31□□□□□ -0.76
NCDN-201ENST00000356090 C14orf178Q8N769 122 aaPredicted RBP10.31□□□□□ -0.76
NCDN-201ENST00000356090 NEGR1Q7Z3B1 354 aa10.3□□□□□ -0.76
NCDN-201ENST00000356090 Q8N8P6 123 aa10.3□□□□□ -0.76
NCDN-201ENST00000356090 UBTD1Q9HAC8 227 aa10.3□□□□□ -0.76
NCDN-201ENST00000356090 HHLA3Q9XRX5 114 aa10.3□□□□□ -0.76
NCDN-201ENST00000356090 CEND1Q8N111 149 aa10.3□□□□□ -0.76
NCDN-201ENST00000356090 IGF1P05019 195 aa10.3□□□□□ -0.76
NCDN-201ENST00000356090 PHLDA3Q9Y5J5 127 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms