RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 ABCA4P78363 2273 aa13.22□□□□□ -0.29
ARFGAP1-201ENST00000353546 A0A1W2PPI3 338 aa13.22□□□□□ -0.29
ARFGAP1-201ENST00000353546 FCN3O75636 299 aa13.22□□□□□ -0.29
ARFGAP1-201ENST00000353546 IGLV2-23P01705 113 aa13.22□□□□□ -0.29
ARFGAP1-201ENST00000353546 TTC32Q5I0X7 151 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 ANKRD29Q8N6D5 301 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 MRPL35Q9NZE8 188 aaKnown RBP13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 IGHV3-21A0A0B4J1V1 117 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 CENPVL3A0A0U1RRI6 287 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 IFITM1P13164 125 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 HLA-DRB4P13762 266 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 CD40P25942 277 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 C3orf56Q8N813 242 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 HLA-DRB4X5D2U9 266 aa13.21□□□□□ -0.29
ARFGAP1-201ENST00000353546 TGFAP01135 160 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 C3orf36Q3SXR2 165 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 SPTA1P02549 2419 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 H3BVH4 76 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 MAP1LC3AQ9H492 121 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 IGHV3-72A0A0B4J1Y9 119 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 TNFRSF1AP19438 455 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 Q6ZQT7 251 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 RPEQ96AT9 228 aa13.2□□□□□ -0.3
ARFGAP1-201ENST00000353546 TWIST1Q15672 202 aa13.19□□□□□ -0.3
ARFGAP1-201ENST00000353546 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
ARFGAP1-201ENST00000353546 VCX2Q9H322 139 aa13.19□□□□□ -0.3
ARFGAP1-201ENST00000353546 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
ARFGAP1-201ENST00000353546 TMEM262E9PQX1 116 aa13.19□□□□□ -0.3
ARFGAP1-201ENST00000353546 ENSAO43768 121 aaKnown RBP13.19□□□□□ -0.3
ARFGAP1-201ENST00000353546 SNCGO76070 127 aa13.18□□□□□ -0.3
ARFGAP1-201ENST00000353546 TCL1BO95988 128 aa13.18□□□□□ -0.3
ARFGAP1-201ENST00000353546 VMA21Q3ZAQ7 101 aa13.18□□□□□ -0.3
ARFGAP1-201ENST00000353546 MEIG1Q5JSS6 88 aa13.18□□□□□ -0.3
ARFGAP1-201ENST00000353546 CUL9Q8IWT3 2517 aa13.18□□□□□ -0.3
ARFGAP1-201ENST00000353546 HOXB4P17483 251 aaPredicted RBP13.17□□□□□ -0.3
ARFGAP1-201ENST00000353546 UBE2D3P61077 147 aa13.17□□□□□ -0.3
ARFGAP1-201ENST00000353546 UBE2D2P62837 147 aa13.17□□□□□ -0.3
ARFGAP1-201ENST00000353546 MYMXA0A1B0GTQ4 84 aa13.17□□□□□ -0.3
ARFGAP1-201ENST00000353546 A8MWV9 139 aa13.17□□□□□ -0.3
ARFGAP1-201ENST00000353546 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
ARFGAP1-201ENST00000353546 LYPD2Q6UXB3 125 aa13.17□□□□□ -0.3
ARFGAP1-201ENST00000353546 RAB1BQ9H0U4 201 aa13.17□□□□□ -0.3
ARFGAP1-201ENST00000353546 TLN1Q9Y490 2541 aaKnown RBP13.16□□□□□ -0.3
ARFGAP1-201ENST00000353546 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
ARFGAP1-201ENST00000353546 CCL17Q92583 94 aa13.16□□□□□ -0.3
ARFGAP1-201ENST00000353546 C8orf49Q96NF6 230 aa13.16□□□□□ -0.3
ARFGAP1-201ENST00000353546 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
ARFGAP1-201ENST00000353546 C17orf100A8MU93 164 aa13.16□□□□□ -0.3
ARFGAP1-201ENST00000353546 NDUFA3O95167 84 aa13.16□□□□□ -0.3
ARFGAP1-201ENST00000353546 TRGV9Q99603 122 aa13.16□□□□□ -0.3
ARFGAP1-201ENST00000353546 ARHGAP32A7KAX9 2087 aa13.15□□□□□ -0.3
ARFGAP1-201ENST00000353546 SBSPONQ8IVN8 264 aa13.15□□□□□ -0.3
ARFGAP1-201ENST00000353546 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.31
ARFGAP1-201ENST00000353546 NDUFB3O43676 98 aa13.15□□□□□ -0.31
ARFGAP1-201ENST00000353546 MALRD1Q5VYJ5 2156 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 NCBP2LA6PVI3 153 aaKnown RBP13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 ADIPOQQ15848 244 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 IGFBPL1Q8WX77 278 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 RASL11BQ9BPW5 248 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 ATP5LO75964 103 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 CNTFRP26992 372 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 LINC00311Q8N616 119 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 NUP37Q8NFH4 326 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 RASL10AQ92737 203 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
ARFGAP1-201ENST00000353546 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
ARFGAP1-201ENST00000353546 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
ARFGAP1-201ENST00000353546 RPL27AP46776 148 aaKnown RBP13.13□□□□□ -0.31
ARFGAP1-201ENST00000353546 MSRB1Q9NZV6 116 aa13.13□□□□□ -0.31
ARFGAP1-201ENST00000353546 UBE2D1P51668 147 aa13.12□□□□□ -0.31
ARFGAP1-201ENST00000353546 LYZP61626 148 aa13.12□□□□□ -0.31
ARFGAP1-201ENST00000353546 CTSZQ9UBR2 303 aa13.12□□□□□ -0.31
ARFGAP1-201ENST00000353546 LGALS1P09382 135 aaKnown RBP13.12□□□□□ -0.31
ARFGAP1-201ENST00000353546 HIGD1AQ9Y241 93 aa13.12□□□□□ -0.31
ARFGAP1-201ENST00000353546 CEACAM4O75871 244 aa13.11□□□□□ -0.31
ARFGAP1-201ENST00000353546 RNF185Q96GF1 192 aa13.11□□□□□ -0.31
ARFGAP1-201ENST00000353546 CACNA1BQ00975 2339 aa13.11□□□□□ -0.31
ARFGAP1-201ENST00000353546 LINC01546A6NGU7 62 aa13.11□□□□□ -0.31
ARFGAP1-201ENST00000353546 LINC01619G3V211 115 aa13.11□□□□□ -0.31
ARFGAP1-201ENST00000353546 LOXP28300 417 aaPredicted RBP13.11□□□□□ -0.31
ARFGAP1-201ENST00000353546 C8orf31Q8N9H6 132 aa13.11□□□□□ -0.31
ARFGAP1-201ENST00000353546 PVRIGQ6DKI7 326 aa13.1□□□□□ -0.31
ARFGAP1-201ENST00000353546 CSDC2Q9Y534 153 aaKnown RBP13.1□□□□□ -0.31
ARFGAP1-201ENST00000353546 TNFRSF6BO95407 300 aa13.1□□□□□ -0.31
ARFGAP1-201ENST00000353546 DLX6P56179 175 aa13.1□□□□□ -0.31
ARFGAP1-201ENST00000353546 TMEM75Q8N9X5 138 aa13.1□□□□□ -0.31
ARFGAP1-201ENST00000353546 RAXQ9Y2V3 346 aa13.1□□□□□ -0.31
ARFGAP1-201ENST00000353546 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 IGHV1-8P0DP01 117 aa13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 BSPH1Q075Z2 132 aa13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 LYNX1G3V0Z9 82 aa13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 M0R3E3 92 aa13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 LYNX1P0DP58 116 aa13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 ASIPP42127 132 aa13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 CRIP2P52943 208 aaPredicted RBP13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 SLC25A39Q9BZJ4 359 aaPredicted RBP13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 OR11H6Q8NGC7 330 aa13.09□□□□□ -0.31
ARFGAP1-201ENST00000353546 TMEM155Q4W5P6 130 aa13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 Q6Q795 121 aa13.08□□□□□ -0.32
ARFGAP1-201ENST00000353546 SIGLEC9Q9Y336 463 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms