RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 NUP35Q8NFH5 326 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 DAZAP1Q96EP5 407 aaKnown RBP6.23□□□□□ -1.41
CD44-205ENST00000352818 PACRGQ96M98 296 aaPredicted RBP6.23□□□□□ -1.41
CD44-205ENST00000352818 HIST1H2BLQ99880 126 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 GNB4Q9HAV0 340 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 VPREB3Q9UKI3 123 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 ZNF785A8K8V0 405 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 HIGD1CA8MV81 97 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 M0R3E3 92 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 CHEK1O14757 476 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 CA1P00915 261 aaPredicted RBP6.22□□□□□ -1.41
CD44-205ENST00000352818 IGHG4P01861 327 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 AMBPP02760 352 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 FOXA3P55318 350 aaPredicted RBP6.22□□□□□ -1.41
CD44-205ENST00000352818 TCL1AP56279 114 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 BLCAPP62952 87 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 S100A12P80511 92 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 OR10J3Q5JRS4 329 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 RBPMS2Q6ZRY4 209 aaKnown RBP6.22□□□□□ -1.41
CD44-205ENST00000352818 GLMPQ8WWB7 406 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 ZC2HC1AQ96GY0 325 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 EDA2RQ9HAV5 297 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 MUC4Q99102 2169 aa6.22□□□□□ -1.41
CD44-205ENST00000352818 A0A1B0GW15 77 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 A0A1W2PS18 150 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 CT45A10P0DMU9 189 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 FABP4P15090 132 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 CRISP2P16562 243 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 PSMB8P28062 276 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 HBBP68871 147 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 MRPL54Q6P161 138 aaKnown RBP6.21□□□□□ -1.42
CD44-205ENST00000352818 SBSPONQ8IVN8 264 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 GATD1Q8NB37 220 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 OR10D4PQ8NGN7 298 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 MYOZ3Q8TDC0 251 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 TMEM18Q96B42 140 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 SGK494Q96LW2 274 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 NOL4LQ96MY1 436 aaPredicted RBP6.21□□□□□ -1.42
CD44-205ENST00000352818 PPP1R14DQ9NXH3 145 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 LINC00527Q9UJ94 153 aa6.21□□□□□ -1.42
CD44-205ENST00000352818 IGKV2-40A0A087WW87 121 aaPredicted RBP6.2□□□□□ -1.42
CD44-205ENST00000352818 IGHV3-35A0A0C4DH35 117 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 K7EMT4 169 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 IGKV2D-40P01614 121 aaPredicted RBP6.2□□□□□ -1.42
CD44-205ENST00000352818 APCSP02743 223 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 FRMD6-AS1P0C7T7 363 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 PF4V1P10720 104 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 PYY3Q5JQD4 70 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 FAM162BQ5T6X4 162 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 LCN12Q6JVE5 192 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 Q6ZS46 218 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 Q8N2B8 174 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 RNF152Q8N8N0 203 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 OR4X2Q8NGF9 303 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 OR2D3Q8NGH3 330 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 PRR25Q96S07 402 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 NDFIP1Q9BT67 221 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 TP53TG3Q9ULZ0 132 aa6.2□□□□□ -1.42
CD44-205ENST00000352818 TRAV8-2A0A0B4J237 113 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 APOHP02749 345 aaPredicted RBP6.19□□□□□ -1.42
CD44-205ENST00000352818 ELANEP08246 267 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 BMI1P35226 326 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 CRIP1P50238 77 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 LINC00310P59036 64 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 RPS20P60866 119 aaKnown RBP6.19□□□□□ -1.42
CD44-205ENST00000352818 PAFAH1B2P68402 229 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 SLC35B1P78383 322 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 FOXE3Q13461 319 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 KLF5Q13887 457 aaPredicted RBP6.19□□□□□ -1.42
CD44-205ENST00000352818 JOSD1Q15040 202 aaPredicted RBP6.19□□□□□ -1.42
CD44-205ENST00000352818 PDZD11Q5EBL8 140 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 DMRTA1Q5VZB9 504 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 C8orf86Q6ZUL3 223 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 GPHB5Q86YW7 130 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 NPFFR1Q9GZQ6 430 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 KLK15Q9H2R5 256 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 LENEPQ9Y5L5 61 aa6.19□□□□□ -1.42
CD44-205ENST00000352818 IGHV3OR16-8A0A075B7F1 116 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 A0A1B0GUT8 65 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 A8MWP6 167 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 SOCS3O14543 225 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 SPINK4O60575 86 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 SH2D1AO60880 128 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 TRBV12-3P01733 135 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 SRIP30626 198 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 RAB4BP61018 213 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 SLAQ13239 276 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 GDF5OSQ5U4N7 250 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 SAMD13Q5VXD3 122 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 UNQ9165/PRO28630Q6UXU0 137 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 C9orf47Q6ZRZ4 202 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 TCF24Q7RTU0 167 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 VGLL1Q99990 258 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 ZNF702PQ9H963 129 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 NIT2Q9NQR4 276 aa6.18□□□□□ -1.42
CD44-205ENST00000352818 DAZ1Q9NQZ3 744 aaKnown RBP6.18□□□□□ -1.42
CD44-205ENST00000352818 PEF1Q9UBV8 284 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms