RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF561-AS1K7EIQ3 104 aa5.03□□□□□ -1.6
VCAN-203ENST00000343200 TMEM256-PLSCR3K7ERE1 68 aa5.03□□□□□ -1.6
VCAN-203ENST00000343200 C2orf66Q6UXQ4 117 aa5.03□□□□□ -1.6
VCAN-203ENST00000343200 AMELYQ99218 206 aa5.03□□□□□ -1.6
VCAN-203ENST00000343200 MRPL35Q9NZE8 188 aaKnown RBP5.03□□□□□ -1.6
VCAN-203ENST00000343200 J3QRE1 110 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 LINC01590Q5TEZ4 76 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 LINC00643Q86TS7 51 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 TMEM133Q9H2Q1 129 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 MRPS18CQ9Y3D5 142 aaKnown RBP5.02□□□□□ -1.61
VCAN-203ENST00000343200 LTBP1Q14766 1721 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 PAX8Q06710 450 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 C1orf162Q8NEQ5 155 aaPredicted RBP5.02□□□□□ -1.61
VCAN-203ENST00000343200 PRB2P02812 416 aaPredicted RBP5.02□□□□□ -1.61
VCAN-203ENST00000343200 C16orf47Q6ZP98 133 aaPredicted RBP5.02□□□□□ -1.61
VCAN-203ENST00000343200 RPL15P61313 204 aaKnown RBP5.02□□□□□ -1.61
VCAN-203ENST00000343200 DEFB103AP81534 67 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 LRRC75A-AS1Q8N1F1 130 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 TRGV1A0A0A0MS02 117 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 IGLL5B9A064 214 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 CCL19Q99731 98 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 TTTY12Q9BZ98 90 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 TRBV25-1A0A075B6N4 114 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 CRYGSP22914 178 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 MRPL14Q6P1L8 145 aaKnown RBP5.02□□□□□ -1.61
VCAN-203ENST00000343200 FAM231DQ6ZW35 169 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 C1QL2Q7Z5L3 287 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 F5H768 121 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 ARMS2P0C7Q2 107 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 MRPL51Q4U2R6 128 aaKnown RBP5.02□□□□□ -1.61
VCAN-203ENST00000343200 DPM3Q9P2X0 92 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 COLQQ9Y215 455 aaPredicted RBP5.02□□□□□ -1.61
VCAN-203ENST00000343200 V9GYV3 84 aa5.02□□□□□ -1.61
VCAN-203ENST00000343200 IGHV1OR21-1A0A087WYE8 117 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 TIMM17BO60830 172 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 UCNP55089 124 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 C5orf64Q2M2E5 130 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 C20orf78Q9BR46 151 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 RHOHQ15669 191 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 RFNGQ9Y644 331 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 IGHV1OR15-1A0A075B7D0 117 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 B9A039 149 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 HIGD2BQ4VC39 106 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 YPEL3P61236 119 aaPredicted RBP5.01□□□□□ -1.61
VCAN-203ENST00000343200 WFDC2Q14508 124 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 NRTNQ99748 197 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 WDR83OSQ9Y284 106 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 SHISA3A0PJX4 238 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 NDUFS7O75251 213 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 CXCL10P02778 98 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 NREPQ16612 68 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 Q6ZT83 130 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 C3orf56Q8N813 242 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 S4R3C0 116 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 IGKV1D-13A0A0B4J2D9 117 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 TEX49A0A1B0GTD5 131 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 IGKV1-13P0DP09 117 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 NBEAL1Q6ZS30 2694 aa5.01□□□□□ -1.61
VCAN-203ENST00000343200 A0A087WWL8 130 aa5□□□□□ -1.61
VCAN-203ENST00000343200 NTN3O00634 580 aaPredicted RBP5□□□□□ -1.61
VCAN-203ENST00000343200 COA6Q5JTJ3 125 aaKnown RBP5□□□□□ -1.61
VCAN-203ENST00000343200 PCP2Q8IVA1 136 aa5□□□□□ -1.61
VCAN-203ENST00000343200 MT-ATP8P03928 68 aa5□□□□□ -1.61
VCAN-203ENST00000343200 SERTAD4-AS1Q5TG53 156 aa5□□□□□ -1.61
VCAN-203ENST00000343200 SMIM2Q9BVW6 85 aa5□□□□□ -1.61
VCAN-203ENST00000343200 PFN2P35080 140 aa5□□□□□ -1.61
VCAN-203ENST00000343200 CMC4P56277 68 aaPredicted RBP5□□□□□ -1.61
VCAN-203ENST00000343200 Q8TAT8 98 aa5□□□□□ -1.61
VCAN-203ENST00000343200 IGHV3OR16-8A0A075B7F1 116 aa5□□□□□ -1.61
VCAN-203ENST00000343200 PSCAO43653 123 aa5□□□□□ -1.61
VCAN-203ENST00000343200 LHFPL1Q86WI0 220 aa5□□□□□ -1.61
VCAN-203ENST00000343200 CRYGCP07315 174 aa5□□□□□ -1.61
VCAN-203ENST00000343200 C9orf139Q6ZV77 190 aa5□□□□□ -1.61
VCAN-203ENST00000343200 REPIN1Q9BWE0 567 aaKnown RBP5□□□□□ -1.61
VCAN-203ENST00000343200 TRAV23DV6A0A075B6W5 121 aa5□□□□□ -1.61
VCAN-203ENST00000343200 TMEM61Q8N0U2 210 aa5□□□□□ -1.61
VCAN-203ENST00000343200 OPRPNQ99935 248 aaPredicted RBP5□□□□□ -1.61
VCAN-203ENST00000343200 IGKV1-8A0A0C4DH67 115 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 IL15RAQ13261 267 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 CDPF1Q6NVV7 123 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 CYYR1Q96J86 154 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 TRBV12-3P01733 135 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 ZFP36L2P47974 494 aaKnown RBP4.99□□□□□ -1.61
VCAN-203ENST00000343200 SDHAF1A6NFY7 115 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 LYZL4Q96KX0 146 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 M0QXV9 152 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 BLCAPP62952 87 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 PRDM6Q9NQX0 595 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 CSDC2Q9Y534 153 aaKnown RBP4.99□□□□□ -1.61
VCAN-203ENST00000343200 LY6EQ16553 131 aa4.99□□□□□ -1.61
VCAN-203ENST00000343200 HTN3P15516 51 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 UBE2E1P51965 193 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 TMEM14BQ9NUH8 114 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 TRBV10-2A0A0K0K1G8 114 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 SERP2Q8N6R1 65 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 IL9P15248 144 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 IGHV5-10-1A0A0J9YXX1 117 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 FAM223BA6NKX1 122 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 CRYBA2P53672 197 aa4.98□□□□□ -1.61
VCAN-203ENST00000343200 TMEM196Q5HYL7 178 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms