RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 HBDP02042 147 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 MPV17L2Q567V2 206 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 TMEM219Q86XT9 240 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 USP9YO00507 2555 aaPredicted RBP11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 TRAV41A0A0B4J266 112 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 PAX8Q06710 450 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 AGPAT4-IT1Q9H0P7 198 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 COX11Q9Y6N1 276 aa11.59□□□□□ -0.55
TNFSF13-201ENST00000338784 IGHV3-49A0A0A0MS15 119 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 TRAV8-2A0A0B4J237 113 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 ZNF207O43670 478 aaKnown RBP11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 PPBPP02775 128 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 GNLYP22749 145 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 TMEM78Q5T7P6 136 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 C8orf86Q6ZUL3 223 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 ZNF738Q8NE65 137 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 U3KQE9 123 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 MED13LQ71F56 2210 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 IGHV3OR16-10A0A075B7F0 116 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 FAM223BA6NKX1 122 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 TCF21O43680 179 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 NUDT3O95989 172 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 HIST1H1AQ02539 215 aaPredicted RBP11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 PRSS57Q6UWY2 283 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 FAM223AQ8IWN6 122 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 RNF185Q96GF1 192 aa11.58□□□□□ -0.56
TNFSF13-201ENST00000338784 NOTCH2Q04721 2471 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 IGHV1-69DA0A0B4J2H0 117 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 IGHV1-69P01742 117 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 LGALS9BQ3B8N2 356 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 LGALS9CQ6DKI2 356 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 C12orf54Q6X4T0 127 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 Q6ZVH6 145 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 HIF1ANQ9NWT6 349 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 USP9XQ93008 2570 aaPredicted RBP11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 HIVEP3Q5T1R4 2406 aa11.57□□□□□ -0.56
TNFSF13-201ENST00000338784 COX8AP10176 69 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 FXYD7P58549 80 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 C19orf54Q5BKX5 351 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 PIFOQ8TCI5 191 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 MAP1LC3AQ9H492 121 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 TEX15Q9BXT5 2789 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 IGKV3D-20A0A0C4DH25 116 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 CRIP2P52943 208 aaPredicted RBP11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 BVES-AS1Q5T3Y7 98 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 DPF1Q92782 380 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 LINC00527Q9UJ94 153 aa11.56□□□□□ -0.56
TNFSF13-201ENST00000338784 TRGV3P03979 118 aa11.55□□□□□ -0.56
TNFSF13-201ENST00000338784 PPIFP30405 207 aaKnown RBP11.55□□□□□ -0.56
TNFSF13-201ENST00000338784 BRD3OSQ6XYD6 125 aa11.55□□□□□ -0.56
TNFSF13-201ENST00000338784 C9orf47Q6ZRZ4 202 aa11.55□□□□□ -0.56
TNFSF13-201ENST00000338784 NPFFR1Q9GZQ6 430 aa11.55□□□□□ -0.56
TNFSF13-201ENST00000338784 CACNG7P62955 275 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 IFI27L1Q96BM0 104 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 PIMREGQ9BSJ6 248 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 C11orf21Q9P2W6 132 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 ARL3P36405 182 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 PTTG1IPP53801 180 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 C16orf92Q96LL3 132 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 MEGF9Q9H1U4 602 aa11.54□□□□□ -0.56
TNFSF13-201ENST00000338784 IGHV4-61A0A0C4DH41 118 aa11.53□□□□□ -0.56
TNFSF13-201ENST00000338784 LINC01546A6NGU7 62 aa11.53□□□□□ -0.56
TNFSF13-201ENST00000338784 TNFRSF6BO95407 300 aa11.53□□□□□ -0.56
TNFSF13-201ENST00000338784 UBE2V1Q13404 147 aa11.53□□□□□ -0.56
TNFSF13-201ENST00000338784 OR1N2Q8NGR9 330 aa11.53□□□□□ -0.56
TNFSF13-201ENST00000338784 NXT2Q9NPJ8 142 aaKnown RBP11.53□□□□□ -0.56
TNFSF13-201ENST00000338784 CCL25O15444 150 aa11.52□□□□□ -0.56
TNFSF13-201ENST00000338784 GAS8-AS1O95177 125 aa11.52□□□□□ -0.56
TNFSF13-201ENST00000338784 GLMPQ8WWB7 406 aa11.52□□□□□ -0.56
TNFSF13-201ENST00000338784 IGF1P05019 195 aa11.52□□□□□ -0.57
TNFSF13-201ENST00000338784 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.57
TNFSF13-201ENST00000338784 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
TNFSF13-201ENST00000338784 UTP20O75691 2785 aaKnown RBP11.51□□□□□ -0.57
TNFSF13-201ENST00000338784 NBPF19A0A087WUL8 3843 aa11.51□□□□□ -0.57
TNFSF13-201ENST00000338784 C2orf91Q6ZV80 131 aa11.51□□□□□ -0.57
TNFSF13-201ENST00000338784 SMIM15Q7Z3B0 74 aa11.51□□□□□ -0.57
TNFSF13-201ENST00000338784 CCL19Q99731 98 aa11.51□□□□□ -0.57
TNFSF13-201ENST00000338784 CITED2Q99967 270 aaPredicted RBP11.51□□□□□ -0.57
TNFSF13-201ENST00000338784 IGHV7-4-1A0A0J9YVY3 117 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 NDUFA4O00483 81 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 SNAI2O43623 268 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 EVI2AP22794 236 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 FCER1GP30273 86 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 LEPP41159 167 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 CDKN1BP46527 198 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 C10orf105Q8TEF2 133 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 TAX1BP3O14907 124 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 FGF6P10767 208 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 FOXE3Q13461 319 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 LENEPQ9Y5L5 61 aa11.5□□□□□ -0.57
TNFSF13-201ENST00000338784 TRBV12-3P01733 135 aa11.49□□□□□ -0.57
TNFSF13-201ENST00000338784 GATA1P15976 413 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms