RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ATP5G2Q06055 141 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 TMEM249Q2WGJ8 235 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 BOD1L2Q8IYS8 172 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 WIPF2Q8TF74 440 aaPredicted RBP6.47□□□□□ -1.37
HPS4-201ENST00000336873 IGF2BP2-AS1Q96M15 143 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 MAP1LC3AQ9H492 121 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 ZANQ9Y493 2812 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 CHD6Q8TD26 2715 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 H3BUX3 64 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 MYOZ3Q8TDC0 251 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 SS18L2Q9UHA2 77 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 ZNF256Q9Y2P7 627 aaPredicted RBP6.47□□□□□ -1.37
HPS4-201ENST00000336873 IGHV3-73A0A0B4J1V6 119 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 IGHV2-70DA0A0C4DH43 119 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 FABP5P3A8MUU1 101 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 ESDP10768 282 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
HPS4-201ENST00000336873 SHANK2-AS3Q9BTD1 123 aa6.47□□□□□ -1.37
HPS4-201ENST00000336873 COL27A1Q8IZC6 1860 aaPredicted RBP6.47□□□□□ -1.37
HPS4-201ENST00000336873 CFAP46Q8IYW2 2715 aa6.46□□□□□ -1.37
HPS4-201ENST00000336873 GP9P14770 177 aa6.46□□□□□ -1.37
HPS4-201ENST00000336873 C12orf54Q6X4T0 127 aa6.46□□□□□ -1.37
HPS4-201ENST00000336873 TEX43Q6ZNM6 134 aa6.46□□□□□ -1.37
HPS4-201ENST00000336873 C14orf178Q8N769 122 aaPredicted RBP6.46□□□□□ -1.37
HPS4-201ENST00000336873 IGLV1-47P01700 117 aa6.46□□□□□ -1.38
HPS4-201ENST00000336873 EGR2P11161 476 aaPredicted RBP6.46□□□□□ -1.38
HPS4-201ENST00000336873 IFI27L1Q96BM0 104 aa6.46□□□□□ -1.38
HPS4-201ENST00000336873 GEMIN7Q9H840 131 aaKnown RBP6.46□□□□□ -1.38
HPS4-201ENST00000336873 TEX22C9J3V5 150 aa6.46□□□□□ -1.38
HPS4-201ENST00000336873 HAX1O00165 279 aa6.46□□□□□ -1.38
HPS4-201ENST00000336873 NPYP01303 97 aa6.46□□□□□ -1.38
HPS4-201ENST00000336873 Q6ZQT7 251 aa6.46□□□□□ -1.38
HPS4-201ENST00000336873 NHP2Q9NX24 153 aaKnown RBP6.46□□□□□ -1.38
HPS4-201ENST00000336873 LOC107984156A0A0G2JMH3 177 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 ZNF688P0C7X2 276 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 PRTN3P24158 256 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 PSG9Q00887 426 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 ZNF562Q6V9R5 426 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 ARL17AQ8IVW1 177 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 DKK2Q9UBU2 259 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 USP24Q9UPU5 2620 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 EFNA4P52798 201 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 CR1LQ2VPA4 569 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 PVRIGQ6DKI7 326 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 PET117Q6UWS5 81 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 OR10J6PQ8NGY7 276 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 DPF1Q92782 380 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 A0A087WWL8 130 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 IGKV3D-20A0A0C4DH25 116 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 I3L2K1 104 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 FOXE3Q13461 319 aa6.45□□□□□ -1.38
HPS4-201ENST00000336873 NEU4Q8WWR8 484 aaPredicted RBP6.45□□□□□ -1.38
HPS4-201ENST00000336873 UTP20O75691 2785 aaKnown RBP6.45□□□□□ -1.38
HPS4-201ENST00000336873 A0A1W2PRX2 142 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 FNDC10F2Z333 226 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 OVOL3O00110 214 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 BLCAPP62952 87 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 PCP2Q8IVA1 136 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 HIST1H4GQ99525 98 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 HERV-K104P63124 156 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 MRPL51Q4U2R6 128 aaKnown RBP6.44□□□□□ -1.38
HPS4-201ENST00000336873 TMEM158Q8WZ71 300 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 EEF1AKMT3Q96AZ1 226 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 PRR25Q96S07 402 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 CCL19Q99731 98 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 SIGLEC8Q9NYZ4 499 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 RAI1Q7Z5J4 1906 aaPredicted RBP6.44□□□□□ -1.38
HPS4-201ENST00000336873 TRAV12-2A0A075B6T6 113 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 GAS8-AS1O95177 125 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 PRB1P04280 392 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
HPS4-201ENST00000336873 SMAD7O15105 426 aaKnown RBP6.43□□□□□ -1.38
HPS4-201ENST00000336873 APOMO95445 188 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 HBDP02042 147 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 SCGB1C2P0DMR2 95 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 ADORA2A-AS1P86434 159 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 PAX8Q06710 450 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 SIGLEC15Q6ZMC9 328 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 SPATA12Q7Z6I5 190 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 THAP8Q8NA92 274 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 DUX3Q96PT4 197 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 LTAP01374 205 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 CD7P09564 240 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 ZNF80P51504 273 aaPredicted RBP6.43□□□□□ -1.38
HPS4-201ENST00000336873 TMEM97Q5BJF2 176 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 SMIM20Q8N5G0 67 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 SRSF8Q9BRL6 282 aaKnown RBP6.43□□□□□ -1.38
HPS4-201ENST00000336873 TRAV12-3A0A0B4J271 114 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 A0A0U1RRA0 63 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 IGF1P05019 195 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 ZNF56Q15929 161 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 Q1RN00 199 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 CD300EQ496F6 205 aaPredicted RBP6.43□□□□□ -1.38
HPS4-201ENST00000336873 TMEM170BQ5T4T1 132 aa6.43□□□□□ -1.38
HPS4-201ENST00000336873 A6NDN8 102 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 TRBV12-3P01733 135 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 PRSS2P07478 247 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 CTSGP08311 255 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 RASL11AQ6T310 242 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 C1orf122Q6ZSJ8 110 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms