RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SRSF1Q07955 248 aaKnown RBP eCLIP13.31□□□□□ -0.28
DDX28-201ENST00000332395 ZNF575Q86XF7 245 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 CLEC5AQ9NY25 188 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 MUC21A0A0G2JKD1 596 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 MUC21A0A140T8X8 626 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 A1L4Q6 167 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 OR4C46A6NHA9 309 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 MUC21Q5SSG8 566 aa13.31□□□□□ -0.28
DDX28-201ENST00000332395 FBN2P35556 2912 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
DDX28-201ENST00000332395 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 CSN3P07498 182 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 VAMP3Q15836 100 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 PPBPP02775 128 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 TMEM78Q5T7P6 136 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 FAM104BQ5XKR9 115 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 LCNL1Q6ZST4 164 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 OR4X2Q8NGF9 303 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 C16orf92Q96LL3 132 aa13.3□□□□□ -0.28
DDX28-201ENST00000332395 TAX1BP3O14907 124 aa13.29□□□□□ -0.28
DDX28-201ENST00000332395 CFHR3Q02985 330 aa13.29□□□□□ -0.28
DDX28-201ENST00000332395 LINC01559Q495D7 138 aa13.29□□□□□ -0.28
DDX28-201ENST00000332395 MPV17L2Q567V2 206 aa13.29□□□□□ -0.28
DDX28-201ENST00000332395 AMN1Q8IY45 258 aa13.29□□□□□ -0.28
DDX28-201ENST00000332395 PSMG3-AS1Q96PY0 264 aa13.29□□□□□ -0.28
DDX28-201ENST00000332395 UBR5O95071 2799 aaPredicted RBP13.29□□□□□ -0.28
DDX28-201ENST00000332395 DEFB112Q30KQ8 113 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 C9orf47Q6ZRZ4 202 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 C9orf139Q6ZV77 190 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 SVIPQ8NHG7 77 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 ANKRD17O75179 2603 aaKnown RBP13.28□□□□□ -0.28
DDX28-201ENST00000332395 FAM208BQ5VWN6 2430 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 A0A0G2JLM5 398 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 SYS1-DBNDD2H3BUS1 97 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 LEPROTL1O95214 131 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 IGHV4-59P01825 116 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 TWIST1Q15672 202 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 MAPK1IP1LQ8NDC0 245 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
DDX28-201ENST00000332395 D6R8Y8 96 aa13.27□□□□□ -0.28
DDX28-201ENST00000332395 TGFAP01135 160 aa13.27□□□□□ -0.28
DDX28-201ENST00000332395 RNF151Q2KHN1 245 aa13.27□□□□□ -0.28
DDX28-201ENST00000332395 BVES-AS1Q5T3Y7 98 aa13.27□□□□□ -0.28
DDX28-201ENST00000332395 NPFFR1Q9GZQ6 430 aa13.27□□□□□ -0.28
DDX28-201ENST00000332395 J3QLI3 93 aa13.27□□□□□ -0.29
DDX28-201ENST00000332395 TMEM95Q3KNT9 176 aa13.27□□□□□ -0.29
DDX28-201ENST00000332395 LINC00173Q6ZV60 143 aa13.27□□□□□ -0.29
DDX28-201ENST00000332395 GPHB5Q86YW7 130 aa13.27□□□□□ -0.29
DDX28-201ENST00000332395 U3KQK5 164 aa13.27□□□□□ -0.29
DDX28-201ENST00000332395 LRRK2Q5S007 2527 aa13.26□□□□□ -0.29
DDX28-201ENST00000332395 hDV102S1A0JD36 115 aa13.26□□□□□ -0.29
DDX28-201ENST00000332395 OR5AL1P0C617 328 aa13.26□□□□□ -0.29
DDX28-201ENST00000332395 HIST1H1AQ02539 215 aaPredicted RBP13.26□□□□□ -0.29
DDX28-201ENST00000332395 DEFB125Q8N687 156 aa13.26□□□□□ -0.29
DDX28-201ENST00000332395 C20orf173Q96LM9 149 aa13.26□□□□□ -0.29
DDX28-201ENST00000332395 CNFNQ9BYD5 112 aa13.26□□□□□ -0.29
DDX28-201ENST00000332395 AP5S1Q9NUS5 200 aa13.26□□□□□ -0.29
DDX28-201ENST00000332395 CSPG4Q6UVK1 2322 aa13.26□□□□□ -0.29
DDX28-201ENST00000332395 NUDT3O95989 172 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 MRPL51Q4U2R6 128 aaKnown RBP13.25□□□□□ -0.29
DDX28-201ENST00000332395 SLC25A34Q6PIV7 304 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 ORMDL3Q8N138 153 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 ZNF580Q9UK33 172 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 IGKV3D-20A0A0C4DH25 116 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 ERASQ7Z444 233 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 PRSS3P2Q8NHM4 247 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 C11orf21Q9P2W6 132 aa13.25□□□□□ -0.29
DDX28-201ENST00000332395 FA2HQ7L5A8 372 aa13.24□□□□□ -0.29
DDX28-201ENST00000332395 TMEM191AQ9H0A3 160 aa13.24□□□□□ -0.29
DDX28-201ENST00000332395 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
DDX28-201ENST00000332395 SOCS3O14543 225 aa13.24□□□□□ -0.29
DDX28-201ENST00000332395 C12orf54Q6X4T0 127 aa13.24□□□□□ -0.29
DDX28-201ENST00000332395 SCRT2Q9NQ03 307 aa13.24□□□□□ -0.29
DDX28-201ENST00000332395 MSRB1Q9NZV6 116 aa13.24□□□□□ -0.29
DDX28-201ENST00000332395 POLQO75417 2590 aa13.23□□□□□ -0.29
DDX28-201ENST00000332395 RNF223E7ERA6 249 aa13.23□□□□□ -0.29
DDX28-201ENST00000332395 IFI27P40305 119 aaPredicted RBP13.23□□□□□ -0.29
DDX28-201ENST00000332395 LOXL1Q08397 574 aaPredicted RBP13.23□□□□□ -0.29
DDX28-201ENST00000332395 USP9YO00507 2555 aaPredicted RBP13.23□□□□□ -0.29
DDX28-201ENST00000332395 KRTAP10-9P60411 292 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 TM4SF20Q53R12 229 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 IGHV7-4-1A0A0J9YVY3 117 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 HSBP1L1C9JCN9 74 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 PSMB8P28062 276 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 FOXE3Q13461 319 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 OCIAD2Q56VL3 154 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 RHPN1-AS1Q9BWJ2 59 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 DAZ1Q9NQZ3 744 aaKnown RBP13.22□□□□□ -0.29
DDX28-201ENST00000332395 SIGLEC8Q9NYZ4 499 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 PEF1Q9UBV8 284 aaKnown RBP13.22□□□□□ -0.29
DDX28-201ENST00000332395 HSPB8Q9UJY1 196 aa13.22□□□□□ -0.29
DDX28-201ENST00000332395 LOC389332A0A1B0GUA5 103 aa13.21□□□□□ -0.29
DDX28-201ENST00000332395 CKS2P33552 79 aa13.21□□□□□ -0.29
DDX28-201ENST00000332395 RPL11P62913 178 aaKnown RBP13.21□□□□□ -0.29
DDX28-201ENST00000332395 PET117Q6UWS5 81 aa13.21□□□□□ -0.29
DDX28-201ENST00000332395 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.29
DDX28-201ENST00000332395 MS4A6AQ9H2W1 248 aa13.21□□□□□ -0.29
DDX28-201ENST00000332395 LENEPQ9Y5L5 61 aa13.21□□□□□ -0.29
DDX28-201ENST00000332395 CD5LO43866 347 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms