RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 C16orf92Q96LL3 132 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 C11orf21Q9P2W6 132 aa10.82□□□□□ -0.68
ATP2C1-201ENST00000328560 TNFRSF6BO95407 300 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 TM4SF20Q53R12 229 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 C8orf86Q6ZUL3 223 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 C2orf91Q6ZV80 131 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 DEFB125Q8N687 156 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 RNF185Q96GF1 192 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 CELSR1Q9NYQ6 3014 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 IGKV3D-20A0A0C4DH25 116 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 FBLL1A6NHQ2 334 aaKnown RBP10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 C19orf84I3L1E1 186 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 TRGV3P03979 118 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 DEFB1P60022 68 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 ZNF575Q86XF7 245 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 PIMREGQ9BSJ6 248 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 RAB9AP51151 201 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 TMEM97Q5BJF2 176 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 SLC50A1Q9BRV3 221 aa10.81□□□□□ -0.68
ATP2C1-201ENST00000328560 IGHV3-11P01762 117 aa10.8□□□□□ -0.68
ATP2C1-201ENST00000328560 PCP2Q8IVA1 136 aa10.8□□□□□ -0.68
ATP2C1-201ENST00000328560 CCL19Q99731 98 aa10.8□□□□□ -0.68
ATP2C1-201ENST00000328560 PRORYQ9H606 182 aa10.8□□□□□ -0.68
ATP2C1-201ENST00000328560 LGALS9BQ3B8N2 356 aa10.8□□□□□ -0.68
ATP2C1-201ENST00000328560 SPANXN1Q5VSR9 72 aa10.8□□□□□ -0.68
ATP2C1-201ENST00000328560 LGALS9CQ6DKI2 356 aa10.8□□□□□ -0.68
ATP2C1-201ENST00000328560 ATP5J2P56134 94 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 Q5PR19 223 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 C7orf71A4D174 169 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 SMIM15Q7Z3B0 74 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 RAB37Q96AX2 223 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 TTTY13Q9BZ97 58 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 TRAV8-2A0A0B4J237 113 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 TRAV41A0A0B4J266 112 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 TRAV40A0A0B4J280 105 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 COX8CQ7Z4L0 72 aa10.79□□□□□ -0.68
ATP2C1-201ENST00000328560 IGF1P05019 195 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 C5orf56Q8N8D9 126 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 TMEM158Q8WZ71 300 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 AP1S3Q96PC3 154 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 TRAV8-6A0A0B4J262 113 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 H3BVH4 76 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 TRBV12-3P01733 135 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 PAX8Q06710 450 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 LCNL1Q6ZST4 164 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 HIF1ANQ9NWT6 349 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 A1L4Q6 167 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 CD5LO43866 347 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 LINC01559Q495D7 138 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 GLMPQ8WWB7 406 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 FOXC2Q99958 501 aa10.78□□□□□ -0.68
ATP2C1-201ENST00000328560 TRBV7-1A0A0A6YYK4 115 aa10.77□□□□□ -0.68
ATP2C1-201ENST00000328560 IGHV4-39P01824 125 aa10.77□□□□□ -0.68
ATP2C1-201ENST00000328560 PPBPP02775 128 aa10.77□□□□□ -0.68
ATP2C1-201ENST00000328560 ARL3P36405 182 aa10.77□□□□□ -0.68
ATP2C1-201ENST00000328560 CHTOPQ9Y3Y2 248 aaKnown RBP10.77□□□□□ -0.69
ATP2C1-201ENST00000328560 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
ATP2C1-201ENST00000328560 MOB4Q9Y3A3 225 aa10.77□□□□□ -0.69
ATP2C1-201ENST00000328560 M0R381 172 aa10.76□□□□□ -0.69
ATP2C1-201ENST00000328560 SMAD7O15105 426 aaKnown RBP10.76□□□□□ -0.69
ATP2C1-201ENST00000328560 FGF6P10767 208 aa10.76□□□□□ -0.69
ATP2C1-201ENST00000328560 CACNA1AO00555 2505 aa10.76□□□□□ -0.69
ATP2C1-201ENST00000328560 KLK15Q9H2R5 256 aa10.76□□□□□ -0.69
ATP2C1-201ENST00000328560 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
ATP2C1-201ENST00000328560 CREBBPQ92793 2442 aa10.76□□□□□ -0.69
ATP2C1-201ENST00000328560 FCER1GP30273 86 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 OR2K2Q8NGT1 345 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 DOPEY2Q9Y3R5 2298 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 SRD5A1P18405 259 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 S100A4P26447 101 aaKnown RBP10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 TMEM160Q9NX00 188 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 CIDEAO60543 219 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 PF4V1P10720 104 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 CLUHP3Q96NS8 147 aa10.75□□□□□ -0.69
ATP2C1-201ENST00000328560 RBAKDNA6NC62 111 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 BOD1L2Q8IYS8 172 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 C20orf173Q96LM9 149 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 PEF1Q9UBV8 284 aaKnown RBP10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 H3BUT2 72 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 IGHV1-69P01742 117 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 PRR9Q5T870 116 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 OR1N2Q8NGR9 330 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 IGHV4-61A0A0C4DH41 118 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 F6UB75 175 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
ATP2C1-201ENST00000328560 ACACBO00763 2458 aa10.73□□□□□ -0.69
ATP2C1-201ENST00000328560 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
ATP2C1-201ENST00000328560 SMIM17P0DL12 118 aa10.73□□□□□ -0.69
ATP2C1-201ENST00000328560 DEFB104AQ8WTQ1 72 aa10.73□□□□□ -0.69
ATP2C1-201ENST00000328560 IGHV4-38-2P0DP08 117 aa10.73□□□□□ -0.69
ATP2C1-201ENST00000328560 GCSHP23434 173 aa10.73□□□□□ -0.69
ATP2C1-201ENST00000328560 WFDC12Q8WWY7 111 aa10.73□□□□□ -0.69
ATP2C1-201ENST00000328560 GAGE10A6NGK3 116 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 K7EP13 123 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 SEC11AP67812 179 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 KIR3DS1Q14943 382 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
ATP2C1-201ENST00000328560 A6NDN8 102 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms