RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 TMEM158Q8WZ71 300 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 FOXC2Q99958 501 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 DOPEY2Q9Y3R5 2298 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 FABP5P3A8MUU1 101 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 ATP6V0E1O15342 81 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 DTX2Q86UW9 622 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 MAP1LC3AQ9H492 121 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 MYO18BQ8IUG5 2567 aa15.32■□□□□ 0.04
CRLF3-201ENST00000324238 CREBBPQ92793 2442 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 IGKV3D-20A0A0C4DH25 116 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 IGF1P05019 195 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 ADAMTSL5Q6ZMM2 481 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 Q8N9W7 124 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 AGPAT4-IT1Q9H0P7 198 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 A0A0G2JLM5 398 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 FBLL1A6NHQ2 334 aaKnown RBP15.31■□□□□ 0.04
CRLF3-201ENST00000324238 MEGF9Q9H1U4 602 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 PKD1L2Q7Z442 2459 aa15.31■□□□□ 0.04
CRLF3-201ENST00000324238 TMEM160Q9NX00 188 aa15.3■□□□□ 0.04
CRLF3-201ENST00000324238 SEC11AP67812 179 aa15.3■□□□□ 0.04
CRLF3-201ENST00000324238 KLK15Q9H2R5 256 aa15.3■□□□□ 0.04
CRLF3-201ENST00000324238 KLRB1Q12918 225 aa15.29■□□□□ 0.04
CRLF3-201ENST00000324238 IGKV3-7A0A075B6H7 116 aa15.29■□□□□ 0.04
CRLF3-201ENST00000324238 C9orf118A6NHY6 69 aa15.29■□□□□ 0.04
CRLF3-201ENST00000324238 FXYD2P54710 66 aa15.29■□□□□ 0.04
CRLF3-201ENST00000324238 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.29■□□□□ 0.04
CRLF3-201ENST00000324238 AGRNO00468 2067 aa15.29■□□□□ 0.04
CRLF3-201ENST00000324238 BUB3O43684 328 aa15.28■□□□□ 0.04
CRLF3-201ENST00000324238 S100A7AQ86SG5 101 aa15.28■□□□□ 0.04
CRLF3-201ENST00000324238 A6NDN8 102 aa15.28■□□□□ 0.04
CRLF3-201ENST00000324238 EFNA4P52798 201 aa15.28■□□□□ 0.04
CRLF3-201ENST00000324238 ODF1Q14990 250 aa15.27■□□□□ 0.04
CRLF3-201ENST00000324238 Q8N6K4 173 aa15.27■□□□□ 0.04
CRLF3-201ENST00000324238 M0R1W7 72 aa15.27■□□□□ 0.04
CRLF3-201ENST00000324238 BPESC1Q9GZL8 116 aa15.27■□□□□ 0.04
CRLF3-201ENST00000324238 FAM208BQ5VWN6 2430 aa15.27■□□□□ 0.03
CRLF3-201ENST00000324238 ZANQ9Y493 2812 aa15.27■□□□□ 0.03
CRLF3-201ENST00000324238 TRAV40A0A0B4J280 105 aa15.27■□□□□ 0.03
CRLF3-201ENST00000324238 CLPSL1A2RUU4 121 aa15.27■□□□□ 0.03
CRLF3-201ENST00000324238 HSD52Q0P140 79 aa15.27■□□□□ 0.03
CRLF3-201ENST00000324238 ZC2HC1BQ5TFG8 222 aa15.27■□□□□ 0.03
CRLF3-201ENST00000324238 CCDC140Q96MF4 163 aa15.27■□□□□ 0.03
CRLF3-201ENST00000324238 HHLA3Q9XRX5 114 aa15.27■□□□□ 0.03
CRLF3-201ENST00000324238 SAA4P35542 130 aa15.26■□□□□ 0.03
CRLF3-201ENST00000324238 C11orf71Q6IPW1 123 aa15.26■□□□□ 0.03
CRLF3-201ENST00000324238 ZFAND3Q9H8U3 227 aa15.26■□□□□ 0.03
CRLF3-201ENST00000324238 TMEM8BA6NDV4 472 aa15.26■□□□□ 0.03
CRLF3-201ENST00000324238 CCDC144NLQ6NUI1 221 aa15.26■□□□□ 0.03
CRLF3-201ENST00000324238 OR1N2Q8NGR9 330 aa15.26■□□□□ 0.03
CRLF3-201ENST00000324238 OR2K2Q8NGT1 345 aa15.26■□□□□ 0.03
CRLF3-201ENST00000324238 ZNF502Q8TBZ5 544 aa15.26■□□□□ 0.03
CRLF3-201ENST00000324238 H3BRM9 83 aa15.25■□□□□ 0.03
CRLF3-201ENST00000324238 PSMG3-AS1Q96PY0 264 aa15.25■□□□□ 0.03
CRLF3-201ENST00000324238 SORL1Q92673 2214 aa15.25■□□□□ 0.03
CRLF3-201ENST00000324238 RPS20P60866 119 aaKnown RBP15.25■□□□□ 0.03
CRLF3-201ENST00000324238 FBXL19-AS1Q494R0 122 aa15.25■□□□□ 0.03
CRLF3-201ENST00000324238 FCER1GP30273 86 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 BRD3OSQ6XYD6 125 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 COL25A1Q9BXS0 654 aaPredicted RBP15.24■□□□□ 0.03
CRLF3-201ENST00000324238 TRAV8-2A0A0B4J237 113 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 H3BVH4 76 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 UFSP1Q6NVU6 142 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 MRPL35Q9NZE8 188 aaKnown RBP15.24■□□□□ 0.03
CRLF3-201ENST00000324238 SPCS1Q9Y6A9 102 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 ACACBO00763 2458 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 SMIM17P0DL12 118 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 PRR9Q5T870 116 aa15.24■□□□□ 0.03
CRLF3-201ENST00000324238 ZNF48Q96MX3 618 aaPredicted RBP15.24■□□□□ 0.03
CRLF3-201ENST00000324238 USP9XQ93008 2570 aaPredicted RBP15.23■□□□□ 0.03
CRLF3-201ENST00000324238 COTL1Q14019 142 aa15.23■□□□□ 0.03
CRLF3-201ENST00000324238 MAPKAPK5-AS1Q8N8E1 139 aa15.23■□□□□ 0.03
CRLF3-201ENST00000324238 OR9G4Q8NGQ1 327 aa15.23■□□□□ 0.03
CRLF3-201ENST00000324238 SPANXN1Q5VSR9 72 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 GLMPQ8WWB7 406 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 NHP2Q9NX24 153 aaKnown RBP15.22■□□□□ 0.03
CRLF3-201ENST00000324238 PIEZO1Q92508 2521 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 C19orf84I3L1E1 186 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 GOSR1O95249 250 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 IGKCP01834 107 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 LCNL1Q6ZST4 164 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 C8orf86Q6ZUL3 223 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 GTF2H5Q6ZYL4 71 aa15.22■□□□□ 0.03
CRLF3-201ENST00000324238 PPBPP02775 128 aa15.21■□□□□ 0.03
CRLF3-201ENST00000324238 TMEM78Q5T7P6 136 aa15.21■□□□□ 0.03
CRLF3-201ENST00000324238 COX8CQ7Z4L0 72 aa15.21■□□□□ 0.03
CRLF3-201ENST00000324238 K7EP34 96 aa15.21■□□□□ 0.03
CRLF3-201ENST00000324238 K7ERU9 68 aa15.21■□□□□ 0.03
CRLF3-201ENST00000324238 M0R381 172 aa15.21■□□□□ 0.03
CRLF3-201ENST00000324238 MTURNQ8N3F0 131 aa15.21■□□□□ 0.03
CRLF3-201ENST00000324238 CHAC1Q9BUX1 264 aa15.21■□□□□ 0.03
CRLF3-201ENST00000324238 AJUBAQ96IF1 538 aa15.21■□□□□ 0.02
CRLF3-201ENST00000324238 TRBV25-1A0A075B6N4 114 aa15.2■□□□□ 0.02
CRLF3-201ENST00000324238 A0A1W2PPM0 123 aa15.2■□□□□ 0.02
CRLF3-201ENST00000324238 TRBV12-3P01733 135 aa15.2■□□□□ 0.02
CRLF3-201ENST00000324238 LINC01559Q495D7 138 aa15.2■□□□□ 0.02
CRLF3-201ENST00000324238 OR4X2Q8NGF9 303 aa15.2■□□□□ 0.02
CRLF3-201ENST00000324238 WFDC12Q8WWY7 111 aa15.2■□□□□ 0.02
CRLF3-201ENST00000324238 DPF1Q92782 380 aa15.2■□□□□ 0.02
CRLF3-201ENST00000324238 SIRPDQ9H106 197 aa15.2■□□□□ 0.02
CRLF3-201ENST00000324238 NXT2Q9NPJ8 142 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms