RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 E7EUB6 86 aa6.94□□□□□ -1.3
SSBP2-201ENST00000320672 AGPAT4-IT1Q9H0P7 198 aa6.94□□□□□ -1.3
SSBP2-201ENST00000320672 DOCK10Q96BY6 2186 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
SSBP2-201ENST00000320672 FXYD5Q96DB9 178 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 BRCA1P38398 1863 aaKnown RBP6.93□□□□□ -1.3
SSBP2-201ENST00000320672 I3L3M4 83 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 DSCR9P59020 149 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 SEC11AP67812 179 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 TMEM243Q9BU79 118 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 XIRP1Q702N8 1843 aaKnown RBP6.93□□□□□ -1.3
SSBP2-201ENST00000320672 TRBV20-1A0A075B6N2 111 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.93□□□□□ -1.3
SSBP2-201ENST00000320672 UBE2BP63146 152 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 H3BRN7 92 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 PLA2G2EQ9NZK7 142 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 PIFOQ8TCI5 191 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 AJUBAQ96IF1 538 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 SHISA9B4DS77 424 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 C15orf53Q8NAA6 179 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 PSME4Q14997 1843 aa6.93□□□□□ -1.3
SSBP2-201ENST00000320672 CEP250Q9BV73 2442 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 NTN5Q8WTR8 489 aaPredicted RBP6.92□□□□□ -1.3
SSBP2-201ENST00000320672 IGLC1P0CG04 106 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 CDKN1BP46527 198 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 ZNF491Q8N8L2 437 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 FER1L5A0AVI2 2057 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 P0DMU3 169 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 GVINP1Q7Z2Y8 2422 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 C5orf47Q569G3 176 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 FOXL2NBQ6ZUU3 175 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 CHD5Q8TDI0 1954 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 C11orf53Q8IXP5 236 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 Q8N8P6 123 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 MRPL36Q9P0J6 103 aaKnown RBP6.92□□□□□ -1.3
SSBP2-201ENST00000320672 LINC01548A6NM66 108 aa6.92□□□□□ -1.3
SSBP2-201ENST00000320672 FAM186AA6NE01 2351 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 BVES-AS1Q5T3Y7 98 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 CARD19Q96LW7 228 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 A0A1W2PNU3 283 aaPredicted RBP6.91□□□□□ -1.3
SSBP2-201ENST00000320672 C9orf153Q5TBE3 101 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 IGHV4OR15-8A0A075B7B6 117 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 A0A087WW49 117 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 PRSS46E5RG02 174 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 DOCK9Q9BZ29 2069 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 CCL24O00175 119 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 CEACAM8P31997 349 aaPredicted RBP6.91□□□□□ -1.3
SSBP2-201ENST00000320672 CRYBA4P53673 196 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 FAM110AQ9BQ89 295 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 COL6A6A6NMZ7 2263 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 LRCOL1A6NCL2 159 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 NDUFS8O00217 210 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 CITED1Q99966 193 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 KLF12Q9Y4X4 402 aa6.91□□□□□ -1.3
SSBP2-201ENST00000320672 A8MWP6 167 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 E9PQ18 207 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 Q9H8V8 135 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 IGHV7-4-1A0A0J9YVY3 117 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 IGLC2P0DOY2 106 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 IGLC3P0DOY3 106 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 SPTA1P02549 2419 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 TRAV1-1A0A0B4J248 108 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 TRAV4A0A0B4J268 109 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 PRM2P04554 102 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 MYO7BQ6PIF6 2116 aa6.9□□□□□ -1.3
SSBP2-201ENST00000320672 SCN10AQ9Y5Y9 1956 aa6.9□□□□□ -1.31
SSBP2-201ENST00000320672 DEFB135Q30KP9 77 aa6.9□□□□□ -1.31
SSBP2-201ENST00000320672 ARFGEF3Q5TH69 2177 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 A0A0J9YXV3 536 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 DKK4Q9UBT3 224 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 SS18L2Q9UHA2 77 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 TP53TG3Q9ULZ0 132 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 TRBV6-6A0A0A6YYG2 114 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 CENPVL3A0A0U1RRI6 287 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 GYPEP15421 78 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 PATE2Q6UY27 113 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 SMPXQ9UHP9 88 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 GREB1Q4ZG55 1949 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 MSMPQ1L6U9 139 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 EP300Q09472 2414 aaPredicted RBP6.89□□□□□ -1.31
SSBP2-201ENST00000320672 ESPL1Q14674 2120 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 CD5LO43866 347 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 ZSWIM8A7E2V4 1837 aa6.89□□□□□ -1.31
SSBP2-201ENST00000320672 F8W735 103 aaPredicted RBP6.88□□□□□ -1.31
SSBP2-201ENST00000320672 BUB3O43684 328 aa6.88□□□□□ -1.31
SSBP2-201ENST00000320672 SOCS3O14543 225 aa6.88□□□□□ -1.31
SSBP2-201ENST00000320672 ELANEP08246 267 aa6.88□□□□□ -1.31
SSBP2-201ENST00000320672 C10orf99Q6UWK7 81 aa6.88□□□□□ -1.31
SSBP2-201ENST00000320672 RNF5Q99942 180 aa6.88□□□□□ -1.31
SSBP2-201ENST00000320672 C1QTNF4Q9BXJ3 329 aa6.88□□□□□ -1.31
SSBP2-201ENST00000320672 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
SSBP2-201ENST00000320672 USF3Q68DE3 2245 aa6.88□□□□□ -1.31
SSBP2-201ENST00000320672 C19orf84I3L1E1 186 aa6.88□□□□□ -1.31
SSBP2-201ENST00000320672 CEND1Q8N111 149 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 1641.2 ms