RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 TPSG1Q9NRR2 321 aa13.56□□□□□ -0.24
TRIM9-201ENST00000298355 FAM236AA0A1B0GUQ0 79 aa13.56□□□□□ -0.24
TRIM9-201ENST00000298355 FAM236BA0A1B0GV22 79 aa13.56□□□□□ -0.24
TRIM9-201ENST00000298355 DNAJC30Q96LL9 226 aa13.56□□□□□ -0.24
TRIM9-201ENST00000298355 WNK2Q9Y3S1 2297 aa13.56□□□□□ -0.24
TRIM9-201ENST00000298355 NDUFV3P56181 108 aaKnown RBP13.56□□□□□ -0.24
TRIM9-201ENST00000298355 DTX1Q86Y01 620 aa13.56□□□□□ -0.24
TRIM9-201ENST00000298355 RNASE6Q93091 150 aaKnown RBP13.55□□□□□ -0.24
TRIM9-201ENST00000298355 YLPM1P49750 1951 aaKnown RBP13.55□□□□□ -0.24
TRIM9-201ENST00000298355 IGHV3OR16-10A0A075B7F0 116 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 LINC01620Q4KN68 170 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 PRIMA1Q86XR5 153 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 TMEM86BQ8N661 226 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 NDUFA12Q9UI09 145 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 LYNX1G3V0Z9 82 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 LYNX1P0DP58 116 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 EP300Q09472 2414 aaPredicted RBP13.55□□□□□ -0.24
TRIM9-201ENST00000298355 SDHAF1A6NFY7 115 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 PAX4O43316 350 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 Q6ZPA2 131 aa13.55□□□□□ -0.24
TRIM9-201ENST00000298355 COL4A6Q14031 1691 aa13.54□□□□□ -0.24
TRIM9-201ENST00000298355 TRAV13-1A0A0B4J241 112 aa13.54□□□□□ -0.24
TRIM9-201ENST00000298355 TRPT1Q86TN4 253 aaKnown RBP13.54□□□□□ -0.24
TRIM9-201ENST00000298355 AKAP6Q13023 2319 aa13.54□□□□□ -0.24
TRIM9-201ENST00000298355 NCOR1O75376 2440 aa13.54□□□□□ -0.24
TRIM9-201ENST00000298355 IGKV1OR2-108A0A075B7D4 117 aa13.54□□□□□ -0.24
TRIM9-201ENST00000298355 C19orf71A6NCJ1 209 aa13.54□□□□□ -0.24
TRIM9-201ENST00000298355 DUX4L9Q6RFH8 374 aaPredicted RBP13.54□□□□□ -0.24
TRIM9-201ENST00000298355 DOCK7Q96N67 2140 aa13.54□□□□□ -0.24
TRIM9-201ENST00000298355 ZNF106Q9H2Y7 1883 aaKnown RBP13.54□□□□□ -0.24
TRIM9-201ENST00000298355 IGHV3-73A0A0B4J1V6 119 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 P0C879 139 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 LINC00310P59036 64 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 ZNF503Q96F45 646 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 CRIP3Q6Q6R5 217 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 ATP5J2P56134 94 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 LYPD2Q6UXB3 125 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 Q8N976 141 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 LINC01560Q8TB33 94 aa13.53□□□□□ -0.24
TRIM9-201ENST00000298355 KLHL30-AS1Q8NEE0 82 aa13.52□□□□□ -0.24
TRIM9-201ENST00000298355 ABCA1O95477 2261 aa13.52□□□□□ -0.24
TRIM9-201ENST00000298355 LOXL1Q08397 574 aaPredicted RBP13.52□□□□□ -0.24
TRIM9-201ENST00000298355 ZNF491Q8N8L2 437 aa13.52□□□□□ -0.24
TRIM9-201ENST00000298355 SPATA25Q9BR10 227 aa13.52□□□□□ -0.24
TRIM9-201ENST00000298355 A4D1N5 150 aa13.52□□□□□ -0.25
TRIM9-201ENST00000298355 ADARB2-AS1A8MUL3 147 aa13.52□□□□□ -0.25
TRIM9-201ENST00000298355 MSRB1Q9NZV6 116 aa13.52□□□□□ -0.25
TRIM9-201ENST00000298355 MBD6Q96DN6 1003 aa13.52□□□□□ -0.25
TRIM9-201ENST00000298355 TRBV7-1A0A0A6YYK4 115 aa13.51□□□□□ -0.25
TRIM9-201ENST00000298355 SVIPQ8NHG7 77 aa13.51□□□□□ -0.25
TRIM9-201ENST00000298355 TM2D2Q9BX73 214 aa13.51□□□□□ -0.25
TRIM9-201ENST00000298355 SYNJ2BPP57105 145 aa13.51□□□□□ -0.25
TRIM9-201ENST00000298355 C2orf91Q6ZV80 131 aa13.51□□□□□ -0.25
TRIM9-201ENST00000298355 RNF138Q8WVD3 245 aa13.5□□□□□ -0.25
TRIM9-201ENST00000298355 PEMTQ9UBM1 199 aa13.5□□□□□ -0.25
TRIM9-201ENST00000298355 TRAV12-1A0A0B4J245 112 aa13.5□□□□□ -0.25
TRIM9-201ENST00000298355 MRPL23Q16540 153 aaKnown RBP13.5□□□□□ -0.25
TRIM9-201ENST00000298355 C11orf53Q8IXP5 236 aa13.5□□□□□ -0.25
TRIM9-201ENST00000298355 PRSS22Q9GZN4 317 aa13.5□□□□□ -0.25
TRIM9-201ENST00000298355 TICRRQ7Z2Z1 1910 aa13.5□□□□□ -0.25
TRIM9-201ENST00000298355 LINC00311Q8N616 119 aa13.5□□□□□ -0.25
TRIM9-201ENST00000298355 GATA4P43694 442 aa13.49□□□□□ -0.25
TRIM9-201ENST00000298355 MDS2Q8NDY4 140 aa13.49□□□□□ -0.25
TRIM9-201ENST00000298355 Q8TCH9 128 aa13.49□□□□□ -0.25
TRIM9-201ENST00000298355 I3L3M4 83 aa13.49□□□□□ -0.25
TRIM9-201ENST00000298355 C1orf43Q9BWL3 253 aa13.49□□□□□ -0.25
TRIM9-201ENST00000298355 PHLDA1Q8WV24 401 aaPredicted RBP13.48□□□□□ -0.25
TRIM9-201ENST00000298355 ROS1P08922 2347 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 TRAV41A0A0B4J266 112 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 CFHR4Q92496 578 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 LAMTOR3Q9UHA4 124 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 ATOX1O00244 68 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 TMEM105Q8N8V8 129 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 ZNF407Q9C0G0 2248 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 DIAPH2-AS1Q14236 149 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 OOSP1A8MZH6 123 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 RS1O15537 224 aa13.48□□□□□ -0.25
TRIM9-201ENST00000298355 ITLN2Q8WWU7 325 aaPredicted RBP13.48□□□□□ -0.25
TRIM9-201ENST00000298355 TRBV10-2A0A0K0K1G8 114 aa13.47□□□□□ -0.25
TRIM9-201ENST00000298355 LINC00527Q9UJ94 153 aa13.47□□□□□ -0.25
TRIM9-201ENST00000298355 TCL1BO95988 128 aa13.47□□□□□ -0.25
TRIM9-201ENST00000298355 CMC4P56277 68 aaPredicted RBP13.47□□□□□ -0.25
TRIM9-201ENST00000298355 MUSTN1Q8IVN3 82 aa13.47□□□□□ -0.25
TRIM9-201ENST00000298355 C16orf54Q6UWD8 224 aa13.47□□□□□ -0.25
TRIM9-201ENST00000298355 LINC00322Q6ZN03 302 aaPredicted RBP13.46□□□□□ -0.25
TRIM9-201ENST00000298355 IGHV1-69DA0A0B4J2H0 117 aa13.46□□□□□ -0.25
TRIM9-201ENST00000298355 VWC2LB2RUY7 222 aa13.46□□□□□ -0.25
TRIM9-201ENST00000298355 DYNAPQ8N1N2 210 aa13.46□□□□□ -0.25
TRIM9-201ENST00000298355 PIFOQ8TCI5 191 aa13.46□□□□□ -0.25
TRIM9-201ENST00000298355 USF3Q68DE3 2245 aa13.46□□□□□ -0.25
TRIM9-201ENST00000298355 GTF3C1Q12789 2109 aa13.46□□□□□ -0.26
TRIM9-201ENST00000298355 VMO1Q7Z5L0 202 aa13.46□□□□□ -0.26
TRIM9-201ENST00000298355 BAALC-AS2P0C853 105 aa13.46□□□□□ -0.26
TRIM9-201ENST00000298355 RBMY1FQ15415 496 aaKnown RBP13.46□□□□□ -0.26
TRIM9-201ENST00000298355 C1orf159Q96HA4 380 aa13.46□□□□□ -0.26
TRIM9-201ENST00000298355 TEX36Q5VZQ5 186 aa13.45□□□□□ -0.26
TRIM9-201ENST00000298355 UFSP1Q6NVU6 142 aa13.45□□□□□ -0.26
TRIM9-201ENST00000298355 CCL19Q99731 98 aa13.45□□□□□ -0.26
TRIM9-201ENST00000298355 UBL5Q9BZL1 73 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms