RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 C11orf53Q8IXP5 236 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 WNK2Q9Y3S1 2297 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 BPESC1Q9GZL8 116 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 DNAJC30Q96LL9 226 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 NCOR1O75376 2440 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 DOCK7Q96N67 2140 aa11.25□□□□□ -0.61
COL1A2-201ENST00000297268 LY6DQ14210 128 aa11.25□□□□□ -0.61
COL1A2-201ENST00000297268 SAP30O75446 220 aa11.25□□□□□ -0.61
COL1A2-201ENST00000297268 UBE2E1P51965 193 aa11.25□□□□□ -0.61
COL1A2-201ENST00000297268 INAFM2P0DMQ5 153 aa11.25□□□□□ -0.61
COL1A2-201ENST00000297268 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
COL1A2-201ENST00000297268 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
COL1A2-201ENST00000297268 SCRT2Q9NQ03 307 aa11.25□□□□□ -0.61
COL1A2-201ENST00000297268 J3QQQ9 107 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 DEFB131AP59861 70 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 IGF2BP2-AS1Q96M15 143 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 NDUFA12Q9UI09 145 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 KRTAP27-1Q3LI81 207 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 B4DSR2 109 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 C20orf78Q9BR46 151 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 HLA-DMBP28068 263 aa11.24□□□□□ -0.61
COL1A2-201ENST00000297268 TICRRQ7Z2Z1 1910 aa11.23□□□□□ -0.61
COL1A2-201ENST00000297268 CMC4P56277 68 aaPredicted RBP11.23□□□□□ -0.61
COL1A2-201ENST00000297268 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
COL1A2-201ENST00000297268 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
COL1A2-201ENST00000297268 TEX48A0A1B0GUV7 120 aa11.23□□□□□ -0.61
COL1A2-201ENST00000297268 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
COL1A2-201ENST00000297268 IGHV1OR15-1A0A075B7D0 117 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 NSUN5P1Q3KNT7 163 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 IGHV3-16A0A0C4DH30 117 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 VWC2LB2RUY7 222 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 DTX1Q86Y01 620 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 DYNAPQ8N1N2 210 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 CARD19Q96LW7 228 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 SHANK1Q9Y566 2161 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 PRSS29PA6NIE9 313 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 DSCR9P59020 149 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 RIF1Q5UIP0 2472 aaKnown RBP11.22□□□□□ -0.61
COL1A2-201ENST00000297268 TRBV25-1A0A075B6N4 114 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 RHODO00212 210 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 SOCS3O14543 225 aa11.22□□□□□ -0.61
COL1A2-201ENST00000297268 TRAV12-2A0A075B6T6 113 aa11.21□□□□□ -0.61
COL1A2-201ENST00000297268 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.61
COL1A2-201ENST00000297268 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
COL1A2-201ENST00000297268 CFHR4Q92496 578 aa11.21□□□□□ -0.61
COL1A2-201ENST00000297268 NTN5Q8WTR8 489 aaPredicted RBP11.21□□□□□ -0.61
COL1A2-201ENST00000297268 RNF138Q8WVD3 245 aa11.21□□□□□ -0.61
COL1A2-201ENST00000297268 ABCA1O95477 2261 aa11.21□□□□□ -0.61
COL1A2-201ENST00000297268 DENND4CQ5VZ89 1909 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 IGLL5B9A064 214 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 NDUFA4O00483 81 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 GP9P14770 177 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 FRMD6-AS1P0C7T7 363 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 PATE2Q6UY27 113 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 PLXNB3Q9ULL4 1909 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 TAX1BP3O14907 124 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 C11orf1Q9H5F2 150 aa11.2□□□□□ -0.62
COL1A2-201ENST00000297268 SS18Q15532 418 aa11.19□□□□□ -0.62
COL1A2-201ENST00000297268 UTF1Q5T230 341 aa11.19□□□□□ -0.62
COL1A2-201ENST00000297268 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
COL1A2-201ENST00000297268 GAGE12JA6NER3 117 aa11.19□□□□□ -0.62
COL1A2-201ENST00000297268 GAGE4Q13068 117 aa11.19□□□□□ -0.62
COL1A2-201ENST00000297268 GAGE5Q13069 117 aa11.19□□□□□ -0.62
COL1A2-201ENST00000297268 DOCK10Q96BY6 2186 aa11.19□□□□□ -0.62
COL1A2-201ENST00000297268 AGPAT4-IT1Q9H0P7 198 aa11.19□□□□□ -0.62
COL1A2-201ENST00000297268 FOXE3Q13461 319 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 PRR30Q53SZ7 412 aaPredicted RBP11.18□□□□□ -0.62
COL1A2-201ENST00000297268 C15orf53Q8NAA6 179 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 ACACAQ13085 2346 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 PFN2P35080 140 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 SPRNQ5BIV9 151 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 C8orf31Q8N9H6 132 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 CFC1BP0CG36 223 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 CFC1P0CG37 223 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 ZNF493Q6ZR52 646 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 BOD1L2Q8IYS8 172 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 CADP27708 2225 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 IGLV2-14P01704 120 aa11.18□□□□□ -0.62
COL1A2-201ENST00000297268 KAAG1Q9UBP8 84 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 FAM167A-AS1Q96KT0 104 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 NOTCH4Q99466 2003 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 GAGE7O76087 117 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 GAGE12FP0CL80 117 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 GAGE12GP0CL81 117 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 GAGE12IP0CL82 117 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 FAM215AQ9Y5M1 114 aa11.17□□□□□ -0.62
COL1A2-201ENST00000297268 IGHV1-69DA0A0B4J2H0 117 aa11.16□□□□□ -0.62
COL1A2-201ENST00000297268 IGHV1-69P01742 117 aa11.16□□□□□ -0.62
COL1A2-201ENST00000297268 RNASE13Q5GAN3 156 aaKnown RBP11.16□□□□□ -0.62
COL1A2-201ENST00000297268 CTSZQ9UBR2 303 aa11.16□□□□□ -0.62
COL1A2-201ENST00000297268 COL4A3Q01955 1670 aa11.16□□□□□ -0.62
COL1A2-201ENST00000297268 K7EMI3 77 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms