RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 NUP37Q8NFH4 326 aa11.01□□□□□ -0.65
FUBP1-201ENST00000294623 PTH2Q96A98 100 aa11.01□□□□□ -0.65
FUBP1-201ENST00000294623 IGHV1-69DA0A0B4J2H0 117 aa11.01□□□□□ -0.65
FUBP1-201ENST00000294623 IGHV1-8P0DP01 117 aa11.01□□□□□ -0.65
FUBP1-201ENST00000294623 SPANXCQ9NY87 97 aa11.01□□□□□ -0.65
FUBP1-201ENST00000294623 MDFICQ9P1T7 246 aa11.01□□□□□ -0.65
FUBP1-201ENST00000294623 KAAG1Q9UBP8 84 aa11.01□□□□□ -0.65
FUBP1-201ENST00000294623 LAMA2P24043 3122 aaKnown RBP11.01□□□□□ -0.65
FUBP1-201ENST00000294623 TRAV8-2A0A0B4J237 113 aa11□□□□□ -0.65
FUBP1-201ENST00000294623 GAS8-AS1O95177 125 aa11□□□□□ -0.65
FUBP1-201ENST00000294623 MRPL53Q96EL3 112 aaKnown RBP11□□□□□ -0.65
FUBP1-201ENST00000294623 CACNA1GO43497 2377 aa11□□□□□ -0.65
FUBP1-201ENST00000294623 TIMD4Q96H15 378 aa11□□□□□ -0.65
FUBP1-201ENST00000294623 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
FUBP1-201ENST00000294623 A0A0J9YY99 117 aa10.99□□□□□ -0.65
FUBP1-201ENST00000294623 GATA1P15976 413 aaPredicted RBP10.99□□□□□ -0.65
FUBP1-201ENST00000294623 A0A0B4J2C4 111 aa10.99□□□□□ -0.65
FUBP1-201ENST00000294623 MBD3L4A6NDZ8 208 aaPredicted RBP10.99□□□□□ -0.65
FUBP1-201ENST00000294623 MBD3L3A6NE82 208 aaPredicted RBP10.99□□□□□ -0.65
FUBP1-201ENST00000294623 MBD3L5A6NJ08 208 aaPredicted RBP10.99□□□□□ -0.65
FUBP1-201ENST00000294623 CLEC3BP05452 202 aa10.99□□□□□ -0.65
FUBP1-201ENST00000294623 LY6DQ14210 128 aa10.99□□□□□ -0.65
FUBP1-201ENST00000294623 SMIM20Q8N5G0 67 aa10.99□□□□□ -0.65
FUBP1-201ENST00000294623 SLC25A29Q8N8R3 303 aa10.99□□□□□ -0.65
FUBP1-201ENST00000294623 MBD3L2Q8NHZ7 208 aaPredicted RBP10.99□□□□□ -0.65
FUBP1-201ENST00000294623 TRAV8-4A0A0B4J246 113 aa10.98□□□□□ -0.65
FUBP1-201ENST00000294623 FAM240AA0A1B0GVK7 77 aa10.98□□□□□ -0.65
FUBP1-201ENST00000294623 H3BVH4 76 aa10.98□□□□□ -0.65
FUBP1-201ENST00000294623 IGHV3-30P01768 117 aa10.98□□□□□ -0.65
FUBP1-201ENST00000294623 IGHV3-30-5P0DP03 117 aa10.98□□□□□ -0.65
FUBP1-201ENST00000294623 EFNA4P52798 201 aa10.98□□□□□ -0.65
FUBP1-201ENST00000294623 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
FUBP1-201ENST00000294623 BAALCQ8WXS3 180 aa10.98□□□□□ -0.65
FUBP1-201ENST00000294623 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 CFC1P0CG37 223 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 LOXP28300 417 aaPredicted RBP10.97□□□□□ -0.65
FUBP1-201ENST00000294623 CCDC179H3BU77 68 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 IGLV1-47P01700 117 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 ZNF883P0CG24 379 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 GFRALQ6UXV0 394 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 Q8TAT8 98 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 VKORC1Q9BQB6 163 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 ONECUT1Q9UBC0 465 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 LAMA3Q16787 3333 aa10.97□□□□□ -0.65
FUBP1-201ENST00000294623 TMEM178BH3BS89 294 aa10.96□□□□□ -0.65
FUBP1-201ENST00000294623 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
FUBP1-201ENST00000294623 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.96□□□□□ -0.66
FUBP1-201ENST00000294623 CNTFRP26992 372 aa10.96□□□□□ -0.66
FUBP1-201ENST00000294623 C1orf122Q6ZSJ8 110 aa10.96□□□□□ -0.66
FUBP1-201ENST00000294623 RASL10AQ92737 203 aa10.96□□□□□ -0.66
FUBP1-201ENST00000294623 PLEKHB2Q96CS7 222 aa10.96□□□□□ -0.66
FUBP1-201ENST00000294623 KIR2DL4Q99706 377 aa10.96□□□□□ -0.66
FUBP1-201ENST00000294623 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
FUBP1-201ENST00000294623 C11orf86A6NJI1 115 aa10.95□□□□□ -0.66
FUBP1-201ENST00000294623 C17orf100A8MU93 164 aa10.95□□□□□ -0.66
FUBP1-201ENST00000294623 C9JAW5 83 aa10.95□□□□□ -0.66
FUBP1-201ENST00000294623 CNIH1O95406 144 aa10.95□□□□□ -0.66
FUBP1-201ENST00000294623 MED14OSP0DP75 135 aa10.95□□□□□ -0.66
FUBP1-201ENST00000294623 CFHR4Q92496 578 aa10.95□□□□□ -0.66
FUBP1-201ENST00000294623 SIT1Q9Y3P8 196 aa10.95□□□□□ -0.66
FUBP1-201ENST00000294623 IGLV11-55A0A075B6I3 123 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 IGHV3-72A0A0B4J1Y9 119 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 TRAV4A0A0B4J268 109 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 IGKV3D-20A0A0C4DH25 116 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 BUB1B-PAK6H3BSN5 160 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 TRGV3P03979 118 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 APELAP0DMC3 54 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 SPANXN1Q5VSR9 72 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 C2orf66Q6UXQ4 117 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 Q8N1Y9 231 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 TMEM141Q96I45 108 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 LENEPQ9Y5L5 61 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 TRBV10-2A0A0K0K1G8 114 aa10.94□□□□□ -0.66
FUBP1-201ENST00000294623 IMUPQ9GZP8 106 aa10.93□□□□□ -0.66
FUBP1-201ENST00000294623 XIRP2A4UGR9 3374 aa10.93□□□□□ -0.66
FUBP1-201ENST00000294623 H3BT86 120 aa10.93□□□□□ -0.66
FUBP1-201ENST00000294623 IGHV3-33P01772 117 aa10.93□□□□□ -0.66
FUBP1-201ENST00000294623 HES1Q14469 280 aa10.93□□□□□ -0.66
FUBP1-201ENST00000294623 C21orf62Q9NYP8 219 aa10.93□□□□□ -0.66
FUBP1-201ENST00000294623 TRAV17A0A0B4J275 112 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 TRBV7-7A0A0K0K1E9 115 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 H3BMM0 161 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 PRTN3P24158 256 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 LINC01620Q4KN68 170 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 FAM159AQ6UWV7 190 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 DYNAPQ8N1N2 210 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 NPBQ8NG41 125 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 UBE2WQ96B02 151 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 ODF3Q96PU9 254 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 DPH3P1Q9H4G8 78 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 SMAD5-AS1Q9Y6J3 95 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 ZNF576Q9H609 170 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 YAE1D1Q9NRH1 226 aa10.92□□□□□ -0.66
FUBP1-201ENST00000294623 TRAV2A0A0B4J234 112 aa10.91□□□□□ -0.66
FUBP1-201ENST00000294623 LGALS9O00182 355 aa10.91□□□□□ -0.66
FUBP1-201ENST00000294623 DEFB121Q5J5C9 76 aa10.91□□□□□ -0.66
FUBP1-201ENST00000294623 MEIG1Q5JSS6 88 aa10.91□□□□□ -0.66
FUBP1-201ENST00000294623 IGFL2Q6UWQ7 119 aa10.91□□□□□ -0.66
FUBP1-201ENST00000294623 TMEM105Q8N8V8 129 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms