RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 C20orf173Q96LM9 149 aa10.68□□□□□ -0.7
NXF1-201ENST00000294172 TLN2Q9Y4G6 2542 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 IGHV4-31P0DP07 118 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 G0S2P27469 103 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 MAJINQ3KP22 176 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 Q5PR19 223 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 C10orf99Q6UWK7 81 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 ZNF493Q6ZR52 646 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 C9orf139Q6ZV77 190 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
NXF1-201ENST00000294172 TIMM8BQ9Y5J9 83 aaPredicted RBP10.67□□□□□ -0.7
NXF1-201ENST00000294172 APCP25054 2843 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 D6R8Y8 96 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 IGLC6P0CF74 106 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 DEFB113Q30KQ7 82 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 GPHB5Q86YW7 130 aa10.67□□□□□ -0.7
NXF1-201ENST00000294172 RPLP1P05386 114 aaKnown RBP10.66□□□□□ -0.7
NXF1-201ENST00000294172 FAM104BQ5XKR9 115 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 MSRB1Q9NZV6 116 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 PEF1Q9UBV8 284 aaKnown RBP10.66□□□□□ -0.7
NXF1-201ENST00000294172 UQCR10Q9UDW1 63 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 NBPF19A0A087WUL8 3843 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 C2orf70A6NJV1 201 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 J3KRW8 73 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 IGLC3P0DOY3 106 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 DEFB1P60022 68 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 SRSF2Q01130 221 aaKnown RBP10.66□□□□□ -0.7
NXF1-201ENST00000294172 LINC01559Q495D7 138 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 Q6ZQT7 251 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 PRSS3P2Q8NHM4 247 aa10.66□□□□□ -0.7
NXF1-201ENST00000294172 LOC389332A0A1B0GUA5 103 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 LEPROTL1O95214 131 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 SRD5A1P18405 259 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 PSMB8P28062 276 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 FOXE3Q13461 319 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 ANKRD39Q53RE8 183 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 Q6ZN92 141 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 LINC00173Q6ZV60 143 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 KLHDC1Q8N7A1 406 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 DAZ1Q9NQZ3 744 aaKnown RBP10.65□□□□□ -0.7
NXF1-201ENST00000294172 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 CHD6Q8TD26 2715 aa10.65□□□□□ -0.7
NXF1-201ENST00000294172 IGKV3D-20A0A0C4DH25 116 aa10.64□□□□□ -0.71
NXF1-201ENST00000294172 IGHV7-4-1A0A0J9YVY3 117 aa10.64□□□□□ -0.71
NXF1-201ENST00000294172 EDN2P20800 178 aa10.64□□□□□ -0.71
NXF1-201ENST00000294172 PRELID3AQ96N28 172 aa10.64□□□□□ -0.71
NXF1-201ENST00000294172 BEX4Q9NWD9 120 aaPredicted RBP10.64□□□□□ -0.71
NXF1-201ENST00000294172 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
NXF1-201ENST00000294172 ZNF25P17030 456 aaPredicted RBP10.64□□□□□ -0.71
NXF1-201ENST00000294172 HIST1H1AQ02539 215 aaPredicted RBP10.64□□□□□ -0.71
NXF1-201ENST00000294172 MRPL51Q4U2R6 128 aaKnown RBP10.64□□□□□ -0.71
NXF1-201ENST00000294172 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
NXF1-201ENST00000294172 Q96MF0 132 aa10.64□□□□□ -0.71
NXF1-201ENST00000294172 CCDC168Q8NDH2 2452 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 MYO9AB2RTY4 2548 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 SOCS3O14543 225 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 FAM106AQ4KMX7 169 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 SPATA12Q7Z6I5 190 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 TMEM70Q9BUB7 260 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 AP5S1Q9NUS5 200 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 VPREB3Q9UKI3 123 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 CKS2P33552 79 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 IFI27P40305 119 aaPredicted RBP10.63□□□□□ -0.71
NXF1-201ENST00000294172 HNRNPA3P51991 378 aaKnown RBP10.63□□□□□ -0.71
NXF1-201ENST00000294172 PSMG3-AS1Q96PY0 264 aa10.63□□□□□ -0.71
NXF1-201ENST00000294172 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 F6UB75 175 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 HOXA3O43365 443 aaPredicted RBP10.62□□□□□ -0.71
NXF1-201ENST00000294172 NCR2O95944 276 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 CR1P17927 2039 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 ZNF469Q96JG9 3925 aaPredicted RBP10.62□□□□□ -0.71
NXF1-201ENST00000294172 TENM4Q6N022 2769 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 H0Y8G0 127 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 PRR9Q5T870 116 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 Q6YL49 198 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 SMPXQ9UHP9 88 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 ZNF580Q9UK33 172 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 U3KQK5 164 aa10.62□□□□□ -0.71
NXF1-201ENST00000294172 OVOL1O14753 267 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 FSHBP01225 129 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 OR5AL1P0C617 328 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 DUX5Q96PT3 197 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 TMEM191AQ9H0A3 160 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 SIGLEC8Q9NYZ4 499 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 SYS1-DBNDD2H3BUS1 97 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 TFPI2P48307 235 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 WFDC3Q8IUB2 231 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 LINC00477Q96M19 166 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 CNFNQ9BYD5 112 aa10.61□□□□□ -0.71
NXF1-201ENST00000294172 PRRC2AP48634 2157 aaKnown RBP10.6□□□□□ -0.71
NXF1-201ENST00000294172 IGLL1P15814 213 aa10.6□□□□□ -0.71
NXF1-201ENST00000294172 PRSS57Q6UWY2 283 aa10.6□□□□□ -0.71
NXF1-201ENST00000294172 LRRC75A-AS1Q8N1F1 130 aa10.6□□□□□ -0.71
NXF1-201ENST00000294172 OR10AG1Q8NH19 301 aa10.6□□□□□ -0.71
NXF1-201ENST00000294172 PPP1R14DQ9NXH3 145 aa10.6□□□□□ -0.71
NXF1-201ENST00000294172 SONP18583 2426 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms