RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 IGKCP01834 107 aa13.9□□□□□ -0.18
TRAF4-201ENST00000262395 J3KRW8 73 aa13.89□□□□□ -0.19
TRAF4-201ENST00000262395 CEACAM3P40198 252 aa13.89□□□□□ -0.19
TRAF4-201ENST00000262395 ECSCRQ19T08 205 aa13.89□□□□□ -0.19
TRAF4-201ENST00000262395 TRBV25-1A0A075B6N4 114 aa13.88□□□□□ -0.19
TRAF4-201ENST00000262395 AGRNO00468 2067 aa13.88□□□□□ -0.19
TRAF4-201ENST00000262395 TTC9CQ8N5M4 171 aa13.88□□□□□ -0.19
TRAF4-201ENST00000262395 LY6G5BQ8NDX9 201 aa13.88□□□□□ -0.19
TRAF4-201ENST00000262395 OR11H6Q8NGC7 330 aa13.88□□□□□ -0.19
TRAF4-201ENST00000262395 IGKV3D-20A0A0C4DH25 116 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 MRPL35Q9NZE8 188 aaKnown RBP13.87□□□□□ -0.19
TRAF4-201ENST00000262395 CLEC3BP05452 202 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 SMIM17P0DL12 118 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 MAPKAPK5-AS1Q8N8E1 139 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 SIGMAR1Q99720 223 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 EFNA4P52798 201 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 C15orf32Q32M92 178 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 MTURNQ8N3F0 131 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 OR5A1Q8NGJ0 315 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 KLK15Q9H2R5 256 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 CELSR1Q9NYQ6 3014 aa13.87□□□□□ -0.19
TRAF4-201ENST00000262395 ATRXP46100 2492 aa13.86□□□□□ -0.19
TRAF4-201ENST00000262395 NXT2Q9NPJ8 142 aaKnown RBP13.86□□□□□ -0.19
TRAF4-201ENST00000262395 COX8CQ7Z4L0 72 aa13.86□□□□□ -0.19
TRAF4-201ENST00000262395 SVIPQ8NHG7 77 aa13.86□□□□□ -0.19
TRAF4-201ENST00000262395 VMO1Q7Z5L0 202 aa13.85□□□□□ -0.19
TRAF4-201ENST00000262395 PSMG3-AS1Q96PY0 264 aa13.85□□□□□ -0.19
TRAF4-201ENST00000262395 AGPAT4-IT1Q9H0P7 198 aa13.85□□□□□ -0.19
TRAF4-201ENST00000262395 TSSC4Q9Y5U2 329 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-201ENST00000262395 IGHV7-81A0A0B4J1V7 117 aa13.85□□□□□ -0.19
TRAF4-201ENST00000262395 DPM2O94777 84 aa13.85□□□□□ -0.19
TRAF4-201ENST00000262395 CDSNQ15517 529 aa13.84□□□□□ -0.19
TRAF4-201ENST00000262395 LCNL1Q6ZST4 164 aa13.84□□□□□ -0.19
TRAF4-201ENST00000262395 ZMAT4Q9H898 229 aa13.84□□□□□ -0.19
TRAF4-201ENST00000262395 CLEC19AQ6UXS0 136 aa13.84□□□□□ -0.19
TRAF4-201ENST00000262395 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.84□□□□□ -0.19
TRAF4-201ENST00000262395 LINC01548A6NM66 108 aa13.83□□□□□ -0.2
TRAF4-201ENST00000262395 ODF3BA8MYP8 253 aa13.83□□□□□ -0.2
TRAF4-201ENST00000262395 COL6A6A6NMZ7 2263 aa13.83□□□□□ -0.2
TRAF4-201ENST00000262395 G3V318 75 aa13.83□□□□□ -0.2
TRAF4-201ENST00000262395 PRTN3P24158 256 aa13.83□□□□□ -0.2
TRAF4-201ENST00000262395 ZNF48Q96MX3 618 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-201ENST00000262395 PTPRQQ9UMZ3 2332 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 A0A1B0GV72 72 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 AMTNQ6UX39 209 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 Q8N8P6 123 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 DEFB104AQ8WTQ1 72 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 BUB3O43684 328 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 LINC01559Q495D7 138 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 TMEM190Q8WZ59 177 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 CNFNQ9BYD5 112 aa13.82□□□□□ -0.2
TRAF4-201ENST00000262395 IGLV2-18A0A075B6J9 118 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 CEND1Q8N111 149 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 MYOZ3Q8TDC0 251 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 WFDC12Q8WWY7 111 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 TIMD4Q96H15 378 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 GAGE12HA6NDE8 117 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 IGF1P05019 195 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 WFDC2Q14508 124 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 SPANXN1Q5VSR9 72 aa13.81□□□□□ -0.2
TRAF4-201ENST00000262395 PHLDA1Q8WV24 401 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-201ENST00000262395 ZFP36P26651 326 aaKnown RBP13.8□□□□□ -0.2
TRAF4-201ENST00000262395 H3BVH4 76 aa13.8□□□□□ -0.2
TRAF4-201ENST00000262395 DEFB1P60022 68 aa13.8□□□□□ -0.2
TRAF4-201ENST00000262395 ATP6V0BQ99437 205 aa13.8□□□□□ -0.2
TRAF4-201ENST00000262395 ATP6V0E1O15342 81 aa13.8□□□□□ -0.2
TRAF4-201ENST00000262395 Q8N9W7 124 aa13.8□□□□□ -0.2
TRAF4-201ENST00000262395 ZFAND3Q9H8U3 227 aa13.8□□□□□ -0.2
TRAF4-201ENST00000262395 H3BMG7 143 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 LAGE3Q14657 143 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 TMEM78Q5T7P6 136 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 NRACQ8N912 160 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 HIGD1BQ9P298 99 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 LINC00527Q9UJ94 153 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 MSRB2Q9Y3D2 182 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 ATP5LO75964 103 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 RAB9AP51151 201 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 ZNF502Q8TBZ5 544 aa13.79□□□□□ -0.2
TRAF4-201ENST00000262395 IGHV7-4-1A0A0J9YVY3 117 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 CLPSL1A2RUU4 121 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 SCGB2A1O75556 95 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 SH2D6Q7Z4S9 175 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 HIST1H4GQ99525 98 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 TRAV8-2A0A0B4J237 113 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 LINC01546A6NGU7 62 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 CD300EQ496F6 205 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-201ENST00000262395 Q8N6K4 173 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 VKORC1Q9BQB6 163 aa13.78□□□□□ -0.2
TRAF4-201ENST00000262395 MAP1AP78559 2803 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-201ENST00000262395 IGLL5B9A064 214 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.77□□□□□ -0.21
TRAF4-201ENST00000262395 M0R1W7 72 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 NDUFS8O00217 210 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 CCL21O00585 134 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 PRR9Q5T870 116 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 CCDC144NLQ6NUI1 221 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 CCDC140Q96MF4 163 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 M0R381 172 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 ETDBQ3ZM63 59 aa13.77□□□□□ -0.21
TRAF4-201ENST00000262395 PIFOQ8TCI5 191 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms