RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 C9JQL5 133 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 TMEM250H0YL14 139 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 NDUFS6O75380 124 aaKnown RBP7.38□□□□□ -1.23
HMGCL-201ENST00000235958 PRM2P04554 102 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 SRP19P09132 144 aaKnown RBP7.38□□□□□ -1.23
HMGCL-201ENST00000235958 RBMY1A1P0DJD3 496 aaKnown RBP7.38□□□□□ -1.23
HMGCL-201ENST00000235958 RBMY1CP0DJD4 496 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 RPL35P42766 123 aaKnown RBP7.38□□□□□ -1.23
HMGCL-201ENST00000235958 TAS2R60P59551 318 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 PEA15Q15121 130 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 RBMY1FQ15415 496 aaKnown RBP7.38□□□□□ -1.23
HMGCL-201ENST00000235958 PRR9Q5T870 116 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 Q6ZQT7 251 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 BAGE2Q86Y30 109 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 OR11H2Q8NH07 326 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 LINC01587Q99440 93 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 SPATA25Q9BR10 227 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 ZMAT4Q9H898 229 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 GOLT1BQ9Y3E0 138 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 PRKDCP78527 4128 aaKnown RBP7.37□□□□□ -1.23
HMGCL-201ENST00000235958 TENM3Q9P273 2699 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 INSP01308 110 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 LTAP01374 205 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 ZNF80P51504 273 aaPredicted RBP7.37□□□□□ -1.23
HMGCL-201ENST00000235958 CEBPGP53567 150 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 BTN1A1Q13410 526 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 SMUG1Q53HV7 270 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 ZNF705AQ6ZN79 300 aaPredicted RBP7.37□□□□□ -1.23
HMGCL-201ENST00000235958 Q86TA4 180 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 C20orf144Q9BQM9 153 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 TMEM208Q9BTX3 173 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 SMDT1Q9H4I9 107 aa7.37□□□□□ -1.23
HMGCL-201ENST00000235958 TGP01266 2768 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 GCGP01275 180 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 HTN1P15515 57 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 CRIP1P50238 77 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 COX8CQ7Z4L0 72 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 TMEM183AQ8IXX5 376 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 TMEM256Q8N2U0 113 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 NIPSNAP3BQ9BS92 247 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 MLST8Q9BVC4 326 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 X6R8D5 127 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 DNAH9Q9NYC9 4486 aa7.36□□□□□ -1.23
HMGCL-201ENST00000235958 TRBV20OR9-2A0A075B6H5 130 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 SMIM9A6NGZ8 99 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 FABP5P3A8MUU1 101 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 ZNF705GA8MUZ8 300 aaPredicted RBP7.35□□□□□ -1.23
HMGCL-201ENST00000235958 H7BYZ3 331 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 AZU1P20160 251 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 GNG4P50150 75 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 ZNF674Q2M3X9 581 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 CENPWQ5EE01 88 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 Q6AWC8 147 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 NHLRC2Q8NBF2 726 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 OCC1Q8TAD7 63 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 ZC2HC1AQ96GY0 325 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 NEU1Q99519 415 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 PARLQ9H300 379 aa7.35□□□□□ -1.23
HMGCL-201ENST00000235958 TRAV21A0A0B4J279 112 aa7.34□□□□□ -1.23
HMGCL-201ENST00000235958 LINC00862A6NCI5 91 aa7.34□□□□□ -1.23
HMGCL-201ENST00000235958 PGPEP1LA6NFU8 196 aa7.34□□□□□ -1.23
HMGCL-201ENST00000235958 IGLV2-8P01709 118 aa7.34□□□□□ -1.23
HMGCL-201ENST00000235958 MUC21Q5SSG8 566 aa7.34□□□□□ -1.23
HMGCL-201ENST00000235958 PYGO2Q9BRQ0 406 aa7.34□□□□□ -1.23
HMGCL-201ENST00000235958 C11orf21Q9P2W6 132 aa7.34□□□□□ -1.23
HMGCL-201ENST00000235958 IGHV1OR15-1A0A075B7D0 117 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 ZNF727A8MUV8 499 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 DEFB4AO15263 64 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 PFN1P07737 140 aaKnown RBP7.33□□□□□ -1.24
HMGCL-201ENST00000235958 MIFP14174 115 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 RRN3P1Q2M238 152 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 FAM162BQ5T6X4 162 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 FAM159AQ6UWV7 190 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 LINC00467Q9BRT7 94 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 U3KQK5 164 aa7.33□□□□□ -1.24
HMGCL-201ENST00000235958 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
HMGCL-201ENST00000235958 IGHV4-28A0A0C4DH34 117 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 C9JCJ5 164 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 GNRH2O43555 120 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 SH2D1AO60880 128 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 MGST1P10620 155 aaKnown RBP7.32□□□□□ -1.24
HMGCL-201ENST00000235958 TMEM241Q24JQ0 296 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 ANXA2RQ3ZCQ2 193 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 FAM74A3Q4VXF1 159 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 SOHLH1Q5JUK2 328 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 COMMD7Q86VX2 200 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 EIF4E3Q8N5X7 224 aaKnown RBP7.32□□□□□ -1.24
HMGCL-201ENST00000235958 Q8NAQ8 132 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 SMIM12Q96EX1 92 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 NAGKQ9UJ70 344 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 TP53TG3Q9ULZ0 132 aa7.32□□□□□ -1.24
HMGCL-201ENST00000235958 A0A0J9YWU9 116 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 CBY3A6NI87 242 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 ORM1P02763 201 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 EMP1P54849 157 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 OR5I1Q13606 314 aa7.31□□□□□ -1.24
HMGCL-201ENST00000235958 TDRG1Q3Y452 100 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms