RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 LINC00587B1AMM8 73 aa8.23□□□□□ -1.09
TARDBP-230ENST00000639083 PRR31Q5SQ13 230 aa8.23□□□□□ -1.09
TARDBP-230ENST00000639083 SSBP4Q9BWG4 385 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-230ENST00000639083 SELENOKQ9Y6D0 94 aa8.23□□□□□ -1.09
TARDBP-230ENST00000639083 FBLL1A6NHQ2 334 aaKnown RBP8.22□□□□□ -1.09
TARDBP-230ENST00000639083 SH2D1AO60880 128 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 ZNF80P51504 273 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-230ENST00000639083 COX8CQ7Z4L0 72 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 ATP5L2Q7Z4Y8 100 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 C16orf92Q96LL3 132 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 GSN-AS1Q9NRJ2 163 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 A0A1W2PS18 150 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 TMEM89A2RUT3 159 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 F2Z2F3 143 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 EDN2P20800 178 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 FOXA3P55318 350 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-230ENST00000639083 RPL11P62913 178 aaKnown RBP8.22□□□□□ -1.09
TARDBP-230ENST00000639083 FAM106AQ4KMX7 169 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 FAM162BQ5T6X4 162 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 GPHB5Q86YW7 130 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 RHPN1-AS1Q9BWJ2 59 aa8.22□□□□□ -1.09
TARDBP-230ENST00000639083 DAZ1Q9NQZ3 744 aaKnown RBP8.22□□□□□ -1.09
TARDBP-230ENST00000639083 IGHV7-4-1A0A0J9YVY3 117 aa8.21□□□□□ -1.1
TARDBP-230ENST00000639083 A8MWP6 167 aa8.21□□□□□ -1.1
TARDBP-230ENST00000639083 SRIP30626 198 aa8.21□□□□□ -1.1
TARDBP-230ENST00000639083 HBBP68871 147 aa8.21□□□□□ -1.1
TARDBP-230ENST00000639083 BAGE3Q86Y29 109 aa8.21□□□□□ -1.1
TARDBP-230ENST00000639083 AGPAT4-IT1Q9H0P7 198 aa8.21□□□□□ -1.1
TARDBP-230ENST00000639083 AKAP9Q99996 3911 aa8.21□□□□□ -1.1
TARDBP-230ENST00000639083 IGKV3-7A0A075B6H7 116 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 TMSB15BA0A087X1C1 80 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 RBAKDNA6NC62 111 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 LINC00310P59036 64 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 Q0VG73 95 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 TMEM18Q96B42 140 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 C20orf173Q96LM9 149 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 CUBNO60494 3623 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 TMEM189A5PLL7 270 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 SERF1AO75920 110 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 ELANEP08246 267 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 ZNF705DP0CH99 300 aaPredicted RBP8.2□□□□□ -1.1
TARDBP-230ENST00000639083 ZNF705BP0CI00 300 aaPredicted RBP8.2□□□□□ -1.1
TARDBP-230ENST00000639083 FOXE3Q13461 319 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 MRPL53Q96EL3 112 aaKnown RBP8.2□□□□□ -1.1
TARDBP-230ENST00000639083 NDFIP1Q9BT67 221 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 TPPP3Q9BW30 176 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 SMPXQ9UHP9 88 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 MYO9AB2RTY4 2548 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 ACANP16112 2415 aa8.2□□□□□ -1.1
TARDBP-230ENST00000639083 ARMS2P0C7Q2 107 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 FOXC2Q99958 501 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 NRN1Q9NPD7 142 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 NF1P21359 2839 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 K7EMT4 169 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 HAX1O00165 279 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 SOCS3O14543 225 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 SRD5A1P18405 259 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 BMI1P35226 326 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 TMEM78Q5T7P6 136 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 ZNF738Q8NE65 137 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 MYOZ3Q8TDC0 251 aa8.19□□□□□ -1.1
TARDBP-230ENST00000639083 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 FAM181BA6NEQ2 426 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 ZNF138P52744 262 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 SSTP61278 116 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 KRTAP1-1Q07627 177 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 OR10J3Q5JRS4 329 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 Q8N2B8 174 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 HECTD1Q9ULT8 2610 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 ORM1P02763 201 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 LGALS1P09382 135 aaKnown RBP8.18□□□□□ -1.1
TARDBP-230ENST00000639083 DEFB1P60022 68 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 TEX29Q8N6K0 151 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 UBE2E2Q96LR5 201 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 RCHY1Q96PM5 261 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 UFC1Q9Y3C8 167 aa8.18□□□□□ -1.1
TARDBP-230ENST00000639083 ESDP10768 282 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 KLHDC1Q8N7A1 406 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 RNF152Q8N8N0 203 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 ALKBH7Q9BT30 221 aaPredicted RBP8.17□□□□□ -1.1
TARDBP-230ENST00000639083 FASNP49327 2511 aaKnown RBP8.17□□□□□ -1.1
TARDBP-230ENST00000639083 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 A0A087WW49 117 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 MUC21A0A0G2JKD1 596 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 MUC21A0A140T8X8 626 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 TMEM213A2RRL7 107 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 SYNJ2BPP57105 145 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 RIGQ13278 110 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 IQCJQ1A5X6 159 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 MUC21Q5SSG8 566 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 Q6AWC8 147 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 YAE1D1Q9NRH1 226 aa8.17□□□□□ -1.1
TARDBP-230ENST00000639083 DNAJC9-AS1A6NH13 148 aa8.16□□□□□ -1.1
TARDBP-230ENST00000639083 JOSD1Q15040 202 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms