RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 C9orf47Q6ZRZ4 202 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 SRSF8Q9BRL6 282 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 SBF2Q86WG5 1849 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 A0A096LNI7 61 aa14.27□□□□□ -0.12
CACNA1A-227ENST00000636549 LRRK1Q38SD2 2015 aa14.27□□□□□ -0.12
CACNA1A-227ENST00000636549 DYSFO75923 2080 aa14.27□□□□□ -0.12
CACNA1A-227ENST00000636549 HOXB4P17483 251 aaPredicted RBP14.27□□□□□ -0.12
CACNA1A-227ENST00000636549 CACNA1DQ01668 2161 aa14.27□□□□□ -0.13
CACNA1A-227ENST00000636549 TM2D2Q9BX73 214 aa14.27□□□□□ -0.13
CACNA1A-227ENST00000636549 IGLV3-12A0A075B6K2 115 aa14.27□□□□□ -0.13
CACNA1A-227ENST00000636549 ADAMTSL5Q6ZMM2 481 aa14.27□□□□□ -0.13
CACNA1A-227ENST00000636549 FLVCR1-AS1Q8TAF5 88 aa14.27□□□□□ -0.13
CACNA1A-227ENST00000636549 TRIOBPQ9H2D6 2365 aa14.27□□□□□ -0.13
CACNA1A-227ENST00000636549 CADP27708 2225 aa14.27□□□□□ -0.13
CACNA1A-227ENST00000636549 GYPEP15421 78 aa14.26□□□□□ -0.13
CACNA1A-227ENST00000636549 IFITM2Q01629 132 aa14.26□□□□□ -0.13
CACNA1A-227ENST00000636549 EGR2P11161 476 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST2H2BCQ6DN03 193 aa14.26□□□□□ -0.13
CACNA1A-227ENST00000636549 ABCA4P78363 2273 aa14.26□□□□□ -0.13
CACNA1A-227ENST00000636549 CDKN1BP46527 198 aa14.26□□□□□ -0.13
CACNA1A-227ENST00000636549 CRYGSP22914 178 aa14.26□□□□□ -0.13
CACNA1A-227ENST00000636549 ARID2Q68CP9 1835 aa14.25□□□□□ -0.13
CACNA1A-227ENST00000636549 NACAE9PAV3 2078 aa14.25□□□□□ -0.13
CACNA1A-227ENST00000636549 H0YIZ8 118 aa14.25□□□□□ -0.13
CACNA1A-227ENST00000636549 NDUFS8O00217 210 aa14.25□□□□□ -0.13
CACNA1A-227ENST00000636549 LINC00114Q6XXX2 140 aa14.25□□□□□ -0.13
CACNA1A-227ENST00000636549 WFDC9Q8NEX5 89 aa14.25□□□□□ -0.13
CACNA1A-227ENST00000636549 C8orf31Q8N9H6 132 aa14.25□□□□□ -0.13
CACNA1A-227ENST00000636549 CFHR4Q92496 578 aa14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 CAMK2N2Q96S95 79 aa14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 IGHV4-38-2P0DP08 117 aa14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 C15orf53Q8NAA6 179 aa14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 BOD1L2Q8IYS8 172 aa14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 WIPF2Q8TF74 440 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 IGKV2-24A0A0C4DH68 120 aa14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 GPHB5Q86YW7 130 aa14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 TICRRQ7Z2Z1 1910 aa14.24□□□□□ -0.13
CACNA1A-227ENST00000636549 Q86TA4 180 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 TRPM7Q96QT4 1865 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 IGHV1-24A0A0C4DH33 117 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BKO60814 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BJP06899 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BOP23527 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BBP33778 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BDP58876 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BCP62807 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST2H2BEQ16778 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BHQ93079 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BNQ99877 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 HIST1H2BMQ99879 126 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 NRXN2Q9P2S2 1712 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 Q6P435 159 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 TMEM75Q8N9X5 138 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 OVOL2Q9BRP0 275 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 M0R2N4 97 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 SDK2Q58EX2 2172 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 ZDBF2Q9HCK1 2354 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 DEFB135Q30KP9 77 aa14.23□□□□□ -0.13
CACNA1A-227ENST00000636549 SDHAF1A6NFY7 115 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 KIF26BQ2KJY2 2108 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 WDR83OSQ9Y284 106 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 COL6A6A6NMZ7 2263 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 CTSGP08311 255 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 DEFB113Q30KQ7 82 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 Q6ZS92 163 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 A0A0G2JRQ6 117 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 UBL5Q9BZL1 73 aa14.22□□□□□ -0.13
CACNA1A-227ENST00000636549 IFI6P09912 130 aa14.21□□□□□ -0.13
CACNA1A-227ENST00000636549 LYPD6BQ8NI32 183 aa14.21□□□□□ -0.13
CACNA1A-227ENST00000636549 K7EM74 188 aa14.21□□□□□ -0.13
CACNA1A-227ENST00000636549 K7ERJ3 54 aa14.21□□□□□ -0.13
CACNA1A-227ENST00000636549 C9orf66Q5T8R8 295 aa14.21□□□□□ -0.13
CACNA1A-227ENST00000636549 MRPL52Q86TS9 123 aaKnown RBP14.21□□□□□ -0.13
CACNA1A-227ENST00000636549 FGF6P10767 208 aa14.21□□□□□ -0.13
CACNA1A-227ENST00000636549 GFI1Q99684 422 aa14.21□□□□□ -0.13
CACNA1A-227ENST00000636549 TRAV9-1A0A075B6T8 112 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 SHISA9B4DS77 424 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 INAFM2P0DMQ5 153 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 C17orf77Q96MU5 243 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 SCN10AQ9Y5Y9 1956 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 IGHV4-30-2A0A087WSY4 118 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 SHANK2-AS3Q9BTD1 123 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 A0A087WWC5 75 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 H0Y9J4 135 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 AMTNQ6UX39 209 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 ANK1P16157 1881 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 FREM3P0C091 2139 aa14.2□□□□□ -0.14
CACNA1A-227ENST00000636549 RHODO00212 210 aa14.19□□□□□ -0.14
CACNA1A-227ENST00000636549 C2orf66Q6UXQ4 117 aa14.19□□□□□ -0.14
CACNA1A-227ENST00000636549 SYS1-DBNDD2H3BUS1 97 aa14.19□□□□□ -0.14
CACNA1A-227ENST00000636549 ELANEP08246 267 aa14.19□□□□□ -0.14
CACNA1A-227ENST00000636549 GATA3P23771 443 aa14.19□□□□□ -0.14
CACNA1A-227ENST00000636549 TRAV4A0A0B4J268 109 aa14.19□□□□□ -0.14
CACNA1A-227ENST00000636549 ANKRD39Q53RE8 183 aa14.18□□□□□ -0.14
CACNA1A-227ENST00000636549 OOSP1A8MZH6 123 aa14.18□□□□□ -0.14
CACNA1A-227ENST00000636549 CEP290O15078 2479 aa14.18□□□□□ -0.14
CACNA1A-227ENST00000636549 CACNA1BQ00975 2339 aa14.18□□□□□ -0.14
CACNA1A-227ENST00000636549 FOXE3Q13461 319 aa14.18□□□□□ -0.14
CACNA1A-227ENST00000636549 SMPXQ9UHP9 88 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 296.7 ms