RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MT-ATP8P03928 68 aa11.95□□□□□ -0.5
PMS1-221ENST00000624204 SIGLEC15Q6ZMC9 328 aa11.95□□□□□ -0.5
PMS1-221ENST00000624204 MRPL35Q9NZE8 188 aaKnown RBP11.95□□□□□ -0.5
PMS1-221ENST00000624204 CYSLTR1Q9Y271 337 aa11.95□□□□□ -0.5
PMS1-221ENST00000624204 ZNF502Q8TBZ5 544 aa11.95□□□□□ -0.5
PMS1-221ENST00000624204 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
PMS1-221ENST00000624204 WT1P19544 449 aaPredicted RBP11.95□□□□□ -0.5
PMS1-221ENST00000624204 GATA3P23771 443 aa11.95□□□□□ -0.5
PMS1-221ENST00000624204 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
PMS1-221ENST00000624204 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
PMS1-221ENST00000624204 ZNF71Q9NQZ8 489 aaPredicted RBP11.94□□□□□ -0.5
PMS1-221ENST00000624204 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
PMS1-221ENST00000624204 IGHV3-66A0A0C4DH42 116 aa11.94□□□□□ -0.5
PMS1-221ENST00000624204 TMEM164Q5U3C3 297 aa11.94□□□□□ -0.5
PMS1-221ENST00000624204 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
PMS1-221ENST00000624204 TMEM14CQ9P0S9 112 aa11.94□□□□□ -0.5
PMS1-221ENST00000624204 TTC28Q96AY4 2481 aa11.94□□□□□ -0.5
PMS1-221ENST00000624204 H7C2G1 150 aa11.93□□□□□ -0.5
PMS1-221ENST00000624204 IL4P05112 153 aa11.93□□□□□ -0.5
PMS1-221ENST00000624204 FOXI1Q12951 378 aa11.93□□□□□ -0.5
PMS1-221ENST00000624204 FBXL15Q9H469 300 aa11.93□□□□□ -0.5
PMS1-221ENST00000624204 PSMB2P49721 201 aa11.93□□□□□ -0.5
PMS1-221ENST00000624204 C1orf162Q8NEQ5 155 aaPredicted RBP11.93□□□□□ -0.5
PMS1-221ENST00000624204 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
PMS1-221ENST00000624204 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
PMS1-221ENST00000624204 PROCRQ9UNN8 238 aa11.93□□□□□ -0.5
PMS1-221ENST00000624204 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 TMEM200BQ69YZ2 307 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 RNF183Q96D59 192 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 PRO0461Q9UI25 63 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 IGHV1-46P01743 117 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 EMP1P54849 157 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 RPEQ96AT9 228 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 PGPEP1Q9NXJ5 209 aa11.92□□□□□ -0.5
PMS1-221ENST00000624204 NCBP2LA6PVI3 153 aaKnown RBP11.91□□□□□ -0.5
PMS1-221ENST00000624204 EFNA4P52798 201 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 LINC00574Q9H8X3 128 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 RAI1Q7Z5J4 1906 aaPredicted RBP11.91□□□□□ -0.5
PMS1-221ENST00000624204 IGKV1-17P01599 117 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 GLRXP35754 106 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 SHANK2-AS3Q9BTD1 123 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 ZMAT4Q9H898 229 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 SLC25A15Q9Y619 301 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 TMEM30BQ3MIR4 351 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 PIFOQ8TCI5 191 aa11.91□□□□□ -0.5
PMS1-221ENST00000624204 ATP5LO75964 103 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 ARL3P36405 182 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 XGP55808 180 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 MYOZ3Q8TDC0 251 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 C1QTNF4Q9BXJ3 329 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 CDIP1Q9H305 208 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 CUBNO60494 3623 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 TRBV6-1A0A0K0K1D8 114 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 PSMG4Q5JS54 123 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 C1orf122Q6ZSJ8 110 aa11.9□□□□□ -0.5
PMS1-221ENST00000624204 NXT2Q9NPJ8 142 aaKnown RBP11.9□□□□□ -0.5
PMS1-221ENST00000624204 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
PMS1-221ENST00000624204 SHISA9B4DS77 424 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 HOXA3O43365 443 aaPredicted RBP11.89□□□□□ -0.51
PMS1-221ENST00000624204 MRGPRG-AS1Q2M3A8 158 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 LINC01548A6NM66 108 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 SRSF1Q07955 248 aaKnown RBP eCLIP11.89□□□□□ -0.51
PMS1-221ENST00000624204 LYPD2Q6UXB3 125 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 SCGB1D4Q6XE38 83 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 Q6ZUT4 128 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 NFE4Q86UQ8 179 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 RNF125Q96EQ8 232 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 ANAPC13Q9BS18 74 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 HIF1ANQ9NWT6 349 aa11.89□□□□□ -0.51
PMS1-221ENST00000624204 ZNF80P51504 273 aaPredicted RBP11.88□□□□□ -0.51
PMS1-221ENST00000624204 RNF185Q96GF1 192 aa11.88□□□□□ -0.51
PMS1-221ENST00000624204 GATA4P43694 442 aa11.88□□□□□ -0.51
PMS1-221ENST00000624204 KLRD1Q13241 179 aa11.88□□□□□ -0.51
PMS1-221ENST00000624204 SRSF9Q13242 221 aaKnown RBP eCLIP11.88□□□□□ -0.51
PMS1-221ENST00000624204 HES1Q14469 280 aa11.88□□□□□ -0.51
PMS1-221ENST00000624204 A0A1W2PNU3 283 aaPredicted RBP11.87□□□□□ -0.51
PMS1-221ENST00000624204 OR11H12B2RN74 326 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 H3BRN7 92 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 FHL3Q13643 280 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 OR11H1Q8NG94 326 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 OR11H2Q8NH07 326 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 SIGLEC9Q9Y336 463 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 FAM27E3Q08E93 113 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
PMS1-221ENST00000624204 PRR25Q96S07 402 aa11.87□□□□□ -0.51
PMS1-221ENST00000624204 K7EM74 188 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 ERCC8Q13216 396 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 PPP1R27Q86WC6 154 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 C3orf56Q8N813 242 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 VKORC1Q9BQB6 163 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 SPRY4Q9C004 299 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 SCGB1C2P0DMR2 95 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 TAL2Q16559 108 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 LYNX1G3V0Z9 82 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 LYNX1P0DP58 116 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 SMCPP49901 116 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms