RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 IGFBPL1Q8WX77 278 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 Q9H8V8 135 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 ZNF726P1Q15940 193 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 NCOR1O75376 2440 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
PTPN9-206ENST00000618819 COX7B2Q8TF08 81 aa11.62□□□□□ -0.55
PTPN9-206ENST00000618819 MRPS18CQ9Y3D5 142 aaKnown RBP11.62□□□□□ -0.55
PTPN9-206ENST00000618819 PKIGQ9Y2B9 76 aa11.62□□□□□ -0.55
PTPN9-206ENST00000618819 COL11A1P12107 1806 aaPredicted RBP11.62□□□□□ -0.55
PTPN9-206ENST00000618819 Q6P435 159 aa11.62□□□□□ -0.55
PTPN9-206ENST00000618819 MRPL14Q6P1L8 145 aaKnown RBP11.62□□□□□ -0.55
PTPN9-206ENST00000618819 LYPD2Q6UXB3 125 aa11.62□□□□□ -0.55
PTPN9-206ENST00000618819 MINOS1Q5TGZ0 78 aa11.62□□□□□ -0.55
PTPN9-206ENST00000618819 MINOS1-NBL1R4GNA1 71 aa11.62□□□□□ -0.55
PTPN9-206ENST00000618819 RNF183Q96D59 192 aa11.61□□□□□ -0.55
PTPN9-206ENST00000618819 FUSP35637 526 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTPN9-206ENST00000618819 IGLL5B9A064 214 aa11.61□□□□□ -0.55
PTPN9-206ENST00000618819 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
PTPN9-206ENST00000618819 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.61□□□□□ -0.55
PTPN9-206ENST00000618819 IGKV2-29A2NJV5 120 aaPredicted RBP11.61□□□□□ -0.55
PTPN9-206ENST00000618819 ARFGEF3Q5TH69 2177 aa11.61□□□□□ -0.55
PTPN9-206ENST00000618819 WFDC2Q14508 124 aa11.61□□□□□ -0.55
PTPN9-206ENST00000618819 DYNAPQ8N1N2 210 aa11.61□□□□□ -0.55
PTPN9-206ENST00000618819 IGF2BP2-AS1Q96M15 143 aa11.61□□□□□ -0.55
PTPN9-206ENST00000618819 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 YPEL3P61236 119 aaPredicted RBP11.6□□□□□ -0.55
PTPN9-206ENST00000618819 C1orf53Q5VUE5 145 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 RNF5Q99942 180 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
PTPN9-206ENST00000618819 LY6HO94772 140 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 UNQ6494/PRO21346Q6UXR6 183 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 C8orf86Q6ZUL3 223 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 SPACA3Q8IXA5 215 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 RNF166Q96A37 237 aaPredicted RBP11.6□□□□□ -0.55
PTPN9-206ENST00000618819 ZFP2Q6ZN57 461 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 GBF1Q92538 1859 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 ABCA7Q8IZY2 2146 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 PSME4Q14997 1843 aa11.6□□□□□ -0.55
PTPN9-206ENST00000618819 RUSC1-AS1Q66K80 236 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 WDR86Q86TI4 376 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 PRDM6Q9NQX0 595 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 ARFGEF1Q9Y6D6 1849 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 ARTNQ5T4W7 220 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 DEFB125Q8N687 156 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 IGHV2-70DA0A0C4DH43 119 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
PTPN9-206ENST00000618819 ICOSQ9Y6W8 199 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 FOXE3Q13461 319 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 PRR25Q96S07 402 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 TIMM17AQ99595 171 aa11.59□□□□□ -0.55
PTPN9-206ENST00000618819 YLPM1P49750 1951 aaKnown RBP11.58□□□□□ -0.55
PTPN9-206ENST00000618819 FREM3P0C091 2139 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 ATP6V0E1O15342 81 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 QRFPP83859 136 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 VSIG2Q96IQ7 327 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 FER1L5A0AVI2 2057 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 TRAV4A0A0B4J268 109 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 PROP1O75360 226 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 NDUFB8O95169 186 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 CRYGBP07316 175 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 CEP250Q9BV73 2442 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 IGKV1OR2-108A0A075B7D4 117 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 Q6ZQT7 251 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 FOXI2Q6ZQN5 318 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 SPRY2O43597 315 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 SAA4P35542 130 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 HERV-K104P63124 156 aa11.58□□□□□ -0.56
PTPN9-206ENST00000618819 NREPQ16612 68 aa11.57□□□□□ -0.56
PTPN9-206ENST00000618819 MYOFQ9NZM1 2061 aa11.57□□□□□ -0.56
PTPN9-206ENST00000618819 ARAP2Q8WZ64 1704 aa11.57□□□□□ -0.56
PTPN9-206ENST00000618819 EPOPA6NHQ4 379 aa11.57□□□□□ -0.56
PTPN9-206ENST00000618819 MBD3L4A6NDZ8 208 aaPredicted RBP11.57□□□□□ -0.56
PTPN9-206ENST00000618819 MBD3L3A6NE82 208 aaPredicted RBP11.57□□□□□ -0.56
PTPN9-206ENST00000618819 MBD3L5A6NJ08 208 aaPredicted RBP11.57□□□□□ -0.56
PTPN9-206ENST00000618819 SEC61GP60059 68 aa11.57□□□□□ -0.56
PTPN9-206ENST00000618819 MBD3L2Q8NHZ7 208 aaPredicted RBP11.57□□□□□ -0.56
PTPN9-206ENST00000618819 IGKV2D-24A0A075B6R9 120 aa11.56□□□□□ -0.56
PTPN9-206ENST00000618819 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
PTPN9-206ENST00000618819 LY6DQ14210 128 aa11.56□□□□□ -0.56
PTPN9-206ENST00000618819 GGNQ86UU5 652 aa11.56□□□□□ -0.56
PTPN9-206ENST00000618819 COL8A2P25067 703 aa11.56□□□□□ -0.56
PTPN9-206ENST00000618819 DAND5Q8N907 189 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 GATA4P43694 442 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 MLST8Q9BVC4 326 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 G3V318 75 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 K7EN84 100 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 DOPEY2Q9Y3R5 2298 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 A0A0J9YY99 117 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 ZNF747Q9BV97 191 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 ETDCA0A1B0GVM5 59 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 DOCK4Q8N1I0 1966 aa11.55□□□□□ -0.56
PTPN9-206ENST00000618819 CFPP27918 469 aa11.54□□□□□ -0.56
PTPN9-206ENST00000618819 GATA1P15976 413 aaPredicted RBP11.54□□□□□ -0.56
PTPN9-206ENST00000618819 FAM120AOSQ5T036 256 aa11.54□□□□□ -0.56
PTPN9-206ENST00000618819 KIAA2026Q5HYC2 2103 aa11.54□□□□□ -0.56
PTPN9-206ENST00000618819 SLC25A29Q8N8R3 303 aa11.54□□□□□ -0.56
PTPN9-206ENST00000618819 Q9HAA7 133 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms