RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GATA2P23769 480 aaPredicted RBP7.14□□□□□ -1.27
TTC28-208ENST00000612946 NDUFS7O75251 213 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 VWC2Q2TAL6 325 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 MRPL51Q4U2R6 128 aaKnown RBP7.14□□□□□ -1.27
TTC28-208ENST00000612946 C1orf53Q5VUE5 145 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 COLQQ9Y215 455 aaPredicted RBP7.14□□□□□ -1.27
TTC28-208ENST00000612946 CHCHD2Q9Y6H1 151 aaPredicted RBP7.14□□□□□ -1.27
TTC28-208ENST00000612946 IGKV3D-15A0A087WSY6 115 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 JMJD7-PLA2G4BH0Y9G9 81 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 IGKV3-15P01624 115 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 CR1LQ2VPA4 569 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 ARMS2P0C7Q2 107 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 C5orf64Q2M2E5 130 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 TRBV25-1A0A075B6N4 114 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 LTAP01374 205 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 PTPRBP23467 1997 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 VOPP1Q96AW1 172 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 LSM4Q9Y4Z0 139 aaKnown RBP7.13□□□□□ -1.27
TTC28-208ENST00000612946 PMS2P5A8MQ11 134 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 TP53TG1Q9Y2A0 90 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 LYZL4Q96KX0 146 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 NTF4P34130 210 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 USMG5Q96IX5 58 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 HIVEP3Q5T1R4 2406 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 RBAKDNA6NC62 111 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 A0A1B0GUS0 222 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 EXOC3-AS1Q8N2X6 119 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 MRPL35Q9NZE8 188 aaKnown RBP7.13□□□□□ -1.27
TTC28-208ENST00000612946 ICOSQ9Y6W8 199 aa7.13□□□□□ -1.27
TTC28-208ENST00000612946 TRAV41A0A0B4J266 112 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 MORN5Q5VZ52 161 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 C10orf105Q8TEF2 133 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 FAM223BA6NKX1 122 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 COX6A1P12074 109 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 UCNP55089 124 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 FAM223AQ8IWN6 122 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 TRBV10-2A0A0K0K1G8 114 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 CTSBP07858 339 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 LENEPQ9Y5L5 61 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 C22orf46C9J442 243 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 IGHV3-72A0A0B4J1Y9 119 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 IGKV3OR2-268A0A0C4DH90 116 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 IGKV1D-33P01593 117 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 IGKV1-33P01594 117 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 PSMB8P28062 276 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 PRSS57Q6UWY2 283 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 TECTAO75443 2155 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 CRLF1O75462 422 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 ZNRF1Q8ND25 227 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 LINC00479Q96M42 142 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 TRGV2A0A075B6R0 118 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 PAX8Q06710 450 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 SS18Q15532 418 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 RCHY1Q96PM5 261 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 LINC00527Q9UJ94 153 aa7.12□□□□□ -1.27
TTC28-208ENST00000612946 SRRM5B3KS81 715 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 CFHR2P36980 270 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 BAALC-AS2P0C853 105 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 NEU4Q8WWR8 484 aaPredicted RBP7.11□□□□□ -1.27
TTC28-208ENST00000612946 KIAA1671Q9BY89 1806 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 LEAP2Q969E1 77 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 INSP01308 110 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 AMTNQ6UX39 209 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 IMMP1LQ96LU5 166 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 FAM236DA0A1B0GTK5 79 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 FAM236CP0DP71 79 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 MINOS1Q5TGZ0 78 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 MINOS1-NBL1R4GNA1 71 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 IGHV3-48P01763 117 aa7.11□□□□□ -1.27
TTC28-208ENST00000612946 RNASE2P10153 161 aaKnown RBP7.11□□□□□ -1.27
TTC28-208ENST00000612946 PF4P02776 101 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 BRK1Q8WUW1 75 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
TTC28-208ENST00000612946 SAP30O75446 220 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 Q6Q795 121 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 Q6P435 159 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 FUSP35637 526 aaKnown RBP eCLIP7.1□□□□□ -1.27
TTC28-208ENST00000612946 NBL1P41271 181 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 SUMO4Q6EEV6 95 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 PKIGQ9Y2B9 76 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 PIEZO1Q92508 2521 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 IGHV3-64A0A075B6Q5 118 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 IGKV2-40A0A087WW87 121 aaPredicted RBP7.1□□□□□ -1.27
TTC28-208ENST00000612946 IGKV2D-40P01614 121 aaPredicted RBP7.1□□□□□ -1.27
TTC28-208ENST00000612946 ZNF876PQ49A33 203 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 C14orf178Q8N769 122 aaPredicted RBP7.1□□□□□ -1.27
TTC28-208ENST00000612946 C6orf226Q5I0X4 101 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 LINC01620Q4KN68 170 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 RNF183Q96D59 192 aa7.1□□□□□ -1.27
TTC28-208ENST00000612946 IGFBP6P24592 240 aaPredicted RBP7.09□□□□□ -1.27
TTC28-208ENST00000612946 HAMPP81172 84 aa7.09□□□□□ -1.27
TTC28-208ENST00000612946 CECR9P0C854 216 aa7.09□□□□□ -1.27
TTC28-208ENST00000612946 PCOLCEQ15113 449 aa7.09□□□□□ -1.27
TTC28-208ENST00000612946 TRBV19A0A075B6N1 114 aa7.09□□□□□ -1.27
TTC28-208ENST00000612946 CHCHD5Q9BSY4 110 aa7.09□□□□□ -1.27
TTC28-208ENST00000612946 CDPF1Q6NVV7 123 aa7.09□□□□□ -1.27
TTC28-208ENST00000612946 THAP8Q8NA92 274 aa7.09□□□□□ -1.27
TTC28-208ENST00000612946 GPR179Q6PRD1 2367 aa7.09□□□□□ -1.28
TTC28-208ENST00000612946 SRRM4A7MD48 611 aaKnown RBP7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms