RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ADAMTSL5Q6ZMM2 481 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 TCF24Q7RTU0 167 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 BAGE2Q86Y30 109 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 TMEM61Q8N0U2 210 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 TMEM75Q8N9X5 138 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 OR10G8Q8NGN5 311 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 GLMPQ8WWB7 406 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 LINC00479Q96M42 142 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 SLC50A1Q9BRV3 221 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 OSTCQ9NRP0 149 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 AURKAIP1Q9NWT8 199 aaPredicted RBP7.58□□□□□ -1.2
UPF1-213ENST00000601981 RPH3ALQ9UNE2 315 aa7.58□□□□□ -1.2
UPF1-213ENST00000601981 TRBV24-1A0A075B6N3 115 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 TRAV34A0A0B4J273 112 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 FBLL1A6NHQ2 334 aaKnown RBP7.57□□□□□ -1.2
UPF1-213ENST00000601981 ZNF785A8K8V0 405 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 DIRC3C9JPN6 131 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 LTAP01374 205 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 APOHP02749 345 aaPredicted RBP7.57□□□□□ -1.2
UPF1-213ENST00000601981 PFN1P07737 140 aaKnown RBP7.57□□□□□ -1.2
UPF1-213ENST00000601981 RAB5AP20339 215 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 CSN1S1P47710 185 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 CMC4P56277 68 aaPredicted RBP7.57□□□□□ -1.2
UPF1-213ENST00000601981 KCNIP4Q6PIL6 250 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 GOLT1AQ6ZVE7 132 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 FAM231DQ6ZW35 169 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 Q86TA4 180 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 ZNF331Q9NQX6 463 aaPredicted RBP7.57□□□□□ -1.2
UPF1-213ENST00000601981 BIN3Q9NQY0 253 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 CLEC5AQ9NY25 188 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 URGCP-MRPS24S4R325 110 aa7.57□□□□□ -1.2
UPF1-213ENST00000601981 IGHV3-66A0A0C4DH42 116 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 MGST1P10620 155 aaKnown RBP7.56□□□□□ -1.2
UPF1-213ENST00000601981 KRTAP10-11P60412 298 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 ERVFC1-1P60608 527 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 DEFA6Q01524 100 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 SAMD13Q5VXD3 122 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 MRPL53Q96EL3 112 aaKnown RBP7.56□□□□□ -1.2
UPF1-213ENST00000601981 BTF3L4Q96K17 158 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 PRR25Q96S07 402 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 PYGO2Q9BRQ0 406 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 MLST8Q9BVC4 326 aa7.56□□□□□ -1.2
UPF1-213ENST00000601981 IGKV3-7A0A075B6H7 116 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 TRAV9-1A0A075B6T8 112 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 TGIF2-C20orf24A0A0A6YYL0 155 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 TRAV2A0A0B4J234 112 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 IZUMO1RA6ND01 250 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 M0R3E3 92 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 IGLV2-11P01706 119 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 CXCL1P09341 107 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 FLI1Q01543 452 aaPredicted RBP7.55□□□□□ -1.2
UPF1-213ENST00000601981 OR5I1Q13606 314 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 PSG3Q16557 428 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 TMEM183AQ8IXX5 376 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 FAM210BQ96KR6 192 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 IL36BQ9NZH7 164 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 ZNF492Q9P255 531 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 ZFP30Q9Y2G7 519 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 SELENOKQ9Y6D0 94 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 V9GYV3 84 aa7.55□□□□□ -1.2
UPF1-213ENST00000601981 IBA57Q5T440 356 aaKnown RBP7.54□□□□□ -1.2
UPF1-213ENST00000601981 NHLRC2Q8NBF2 726 aa7.54□□□□□ -1.2
UPF1-213ENST00000601981 MRAPQ8TCY5 172 aa7.54□□□□□ -1.2
UPF1-213ENST00000601981 MS4A6AQ9H2W1 248 aa7.54□□□□□ -1.2
UPF1-213ENST00000601981 PSG8Q9UQ74 426 aa7.54□□□□□ -1.2
UPF1-213ENST00000601981 PRKDCP78527 4128 aaKnown RBP7.54□□□□□ -1.2
UPF1-213ENST00000601981 TRAV8-1A0A0A6YYK1 113 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 TRAV8-2A0A0B4J237 113 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 A0A1W2PPQ1 181 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 RBAKDNA6NC62 111 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 C1orf196B1AJZ1 125 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 PRB2P02812 416 aaPredicted RBP7.53□□□□□ -1.2
UPF1-213ENST00000601981 TYMSP04818 313 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 TFPI2P48307 235 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 RAB5BP61020 215 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 SNRPD3P62318 126 aaKnown RBP7.53□□□□□ -1.2
UPF1-213ENST00000601981 DEFB121Q5J5C9 76 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 PRNTQ86SH4 94 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 WFDC3Q8IUB2 231 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 GBGT1Q8N5D6 347 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 SGK494Q96LW2 274 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 FAM110AQ9BQ89 295 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 RNASE7Q9H1E1 156 aaKnown RBP7.53□□□□□ -1.2
UPF1-213ENST00000601981 NRN1Q9NPD7 142 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 DNAH3Q8TD57 4116 aa7.53□□□□□ -1.2
UPF1-213ENST00000601981 OR11H12B2RN74 326 aa7.52□□□□□ -1.21
UPF1-213ENST00000601981 SOCS3O14543 225 aa7.52□□□□□ -1.21
UPF1-213ENST00000601981 GATCO43716 136 aaKnown RBP7.52□□□□□ -1.21
UPF1-213ENST00000601981 HLA-DMBP28068 263 aa7.52□□□□□ -1.21
UPF1-213ENST00000601981 ID1P41134 155 aa7.52□□□□□ -1.21
UPF1-213ENST00000601981 RPS10P46783 165 aaKnown RBP7.52□□□□□ -1.21
UPF1-213ENST00000601981 CT83Q5H943 113 aa7.52□□□□□ -1.21
UPF1-213ENST00000601981 COX8CQ7Z4L0 72 aa7.52□□□□□ -1.21
UPF1-213ENST00000601981 SRD5A3Q9H8P0 318 aa7.52□□□□□ -1.21
UPF1-213ENST00000601981 IGKV2-40A0A087WW87 121 aaPredicted RBP7.51□□□□□ -1.21
UPF1-213ENST00000601981 C19orf71A6NCJ1 209 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 ZNF705GA8MUZ8 300 aaPredicted RBP7.51□□□□□ -1.21
UPF1-213ENST00000601981 K7EIL1 84 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms