RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 GFRA4Q9GZZ7 299 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 TMEM167BQ9NRX6 74 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 CALYQ9NYX4 217 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 IGKV2D-26A0A0A0MRZ7 120 aa4.34□□□□□ -1.72
LINC01538-201ENST00000588074 TRGV5A0A0B4J1U4 118 aa4.34□□□□□ -1.72
LINC01538-201ENST00000588074 P01737 135 aa4.34□□□□□ -1.72
LINC01538-201ENST00000588074 MRPS36P82909 103 aaKnown RBP4.34□□□□□ -1.72
LINC01538-201ENST00000588074 TFF3Q07654 80 aa4.34□□□□□ -1.72
LINC01538-201ENST00000588074 SRSF9Q13242 221 aaKnown RBP eCLIP4.34□□□□□ -1.72
LINC01538-201ENST00000588074 Q6ZVQ6 151 aa4.34□□□□□ -1.72
LINC01538-201ENST00000588074 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.72
LINC01538-201ENST00000588074 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.72
LINC01538-201ENST00000588074 RPUSD1Q9UJJ7 312 aaKnown RBP4.34□□□□□ -1.72
LINC01538-201ENST00000588074 ARID1AO14497 2285 aa4.34□□□□□ -1.72
LINC01538-201ENST00000588074 ARHGAP21Q5T5U3 1957 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 TRBV10-2A0A0K0K1G8 114 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 PMS2P5A8MQ11 134 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 RPS27P42677 84 aaKnown RBP4.33□□□□□ -1.72
LINC01538-201ENST00000588074 TWIST1Q15672 202 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 WFDC11Q8NEX6 87 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 PRSS3P2Q8NHM4 247 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 OTORQ9NRC9 128 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 RNF7Q9UBF6 113 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 EML5Q05BV3 1969 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 A0A096LNJ9 63 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 A0A0G2JRQ6 117 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 PEX7O00628 323 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 SCRG1O75711 98 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 Q8N7P7 452 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 ZNF442Q9H7R0 627 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 SCN3AQ9NY46 2000 aa4.33□□□□□ -1.72
LINC01538-201ENST00000588074 FANCMQ8IYD8 2048 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 IGLV1-36A0A0B4J1U3 117 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 UPK2O00526 184 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 MRPS12O15235 138 aaKnown RBP4.32□□□□□ -1.72
LINC01538-201ENST00000588074 GATA1P15976 413 aaPredicted RBP4.32□□□□□ -1.72
LINC01538-201ENST00000588074 HMGA1P17096 107 aaKnown RBP4.32□□□□□ -1.72
LINC01538-201ENST00000588074 FCER1GP30273 86 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 RPL18AQ02543 176 aaKnown RBP4.32□□□□□ -1.72
LINC01538-201ENST00000588074 ATXN8Q156A1 80 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 RNF182Q8N6D2 247 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 ZNF355PQ9NSJ1 428 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 LSM7Q9UK45 103 aaKnown RBP4.32□□□□□ -1.72
LINC01538-201ENST00000588074 PCDH15Q96QU1 1955 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 KIAA1549LQ6ZVL6 1849 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 NCBP2LA6PVI3 153 aaKnown RBP4.32□□□□□ -1.72
LINC01538-201ENST00000588074 CCL16O15467 120 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 SLC25A16P16260 332 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 CCL1P22362 96 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 KRTAP27-1Q3LI81 207 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 ZNF818PQ6ZRF7 136 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 FAM218AQ96MZ4 157 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 RTL8AQ9BWD3 113 aa4.32□□□□□ -1.72
LINC01538-201ENST00000588074 KIF26BQ2KJY2 2108 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 INS-IGF2F8WCM5 200 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 K7EMI3 77 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 IGHG2P01859 326 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 ZNF883P0CG24 379 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 SUMO4Q6EEV6 95 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 SDIM1Q6ZPB5 146 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 Q9UF83 564 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 TIMM8BQ9Y5J9 83 aaPredicted RBP4.31□□□□□ -1.72
LINC01538-201ENST00000588074 TDRD6O60522 2096 aaKnown RBP4.31□□□□□ -1.72
LINC01538-201ENST00000588074 TEX49A0A1B0GTD5 131 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 KNCNA6PVL3 124 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 ZNF823P16415 610 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 EMDP50402 254 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 ZNF138P52744 262 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 RIGQ13278 110 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 KISS1Q15726 138 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 MDP1Q86V88 176 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 NDUFA11Q86Y39 141 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 CYSTM1Q9H1C7 97 aa4.31□□□□□ -1.72
LINC01538-201ENST00000588074 DNAH12Q6ZR08 3092 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 TCRAP04437 139 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 PROK1P58294 105 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 PCBD1P61457 104 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 ATP1A1-AS1Q5TC04 95 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 FAM104BQ5XKR9 115 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 VKORC1L1Q8N0U8 176 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 DCAF4L2Q8NA75 395 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 SPACA5Q96QH8 159 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 METTL26Q96S19 204 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 AICDAQ9GZX7 198 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 RPP21Q9H633 154 aaKnown RBP4.3□□□□□ -1.72
LINC01538-201ENST00000588074 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
LINC01538-201ENST00000588074 ZNF492Q9P255 531 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 SCN10AQ9Y5Y9 1956 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 TRBV7-6A0A0J9YX20 115 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 EDDM3BP56851 147 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 PAX8Q06710 450 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 EMC6Q9BV81 110 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 SRXN1Q9BYN0 137 aa4.3□□□□□ -1.72
LINC01538-201ENST00000588074 AMMECR1Q9Y4X0 333 aaPredicted RBP4.3□□□□□ -1.72
LINC01538-201ENST00000588074 IGKV1D-42A0A075B6H8 117 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 IGLV5-52A0A0A0MRZ9 124 aa4.29□□□□□ -1.72
LINC01538-201ENST00000588074 DEFA4P12838 97 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms