RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 EXOC3-AS1Q8N2X6 119 aa10.48□□□□□ -0.73
CDK5RAP3-219ENST00000580670 RPUSD4Q96CM3 377 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-219ENST00000580670 F6UZH7 168 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 PF4P02776 101 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 PSG9Q00887 426 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 IQCJQ1A5X6 159 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 KCNIP4Q6PIL6 250 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 LYPD1Q8N2G4 141 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 TMEM158Q8WZ71 300 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 OTORQ9NRC9 128 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 FBN1P35555 2871 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 IGKV3-7A0A075B6H7 116 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 ZNF253O75346 499 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 SLC25A5P05141 298 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 GBGT1Q8N5D6 347 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 AAMDCQ9H7C9 122 aa10.47□□□□□ -0.73
CDK5RAP3-219ENST00000580670 SCO2A0A1W2PP80 73 aa10.46□□□□□ -0.74
CDK5RAP3-219ENST00000580670 CNN1P51911 297 aaKnown RBP10.46□□□□□ -0.74
CDK5RAP3-219ENST00000580670 IGFL4Q6B9Z1 124 aa10.46□□□□□ -0.74
CDK5RAP3-219ENST00000580670 DYNLRB2Q8TF09 96 aa10.46□□□□□ -0.74
CDK5RAP3-219ENST00000580670 SLC50A1Q9BRV3 221 aa10.46□□□□□ -0.74
CDK5RAP3-219ENST00000580670 NRN1Q9NPD7 142 aa10.46□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ZNF331Q9NQX6 463 aaPredicted RBP10.46□□□□□ -0.74
CDK5RAP3-219ENST00000580670 A0A1W2PPQ1 181 aa10.45□□□□□ -0.74
CDK5RAP3-219ENST00000580670 TCAPO15273 167 aa10.45□□□□□ -0.74
CDK5RAP3-219ENST00000580670 C12orf54Q6X4T0 127 aa10.45□□□□□ -0.74
CDK5RAP3-219ENST00000580670 MRPL52Q86TS9 123 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-219ENST00000580670 C3orf56Q8N813 242 aa10.45□□□□□ -0.74
CDK5RAP3-219ENST00000580670 C5orf17Q8NAS9 161 aa10.45□□□□□ -0.74
CDK5RAP3-219ENST00000580670 CMTM2Q8TAZ6 248 aa10.45□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ZNF747Q9BV97 191 aa10.45□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ERVFC1-1P60608 527 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 GNG5P63218 68 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 C11orf52Q96A22 123 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 C16orf92Q96LL3 132 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 EPDR1Q9UM22 224 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 RPH3ALQ9UNE2 315 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 TRAV8-2A0A0B4J237 113 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 KIR2DL5BA0A0G2JN68 375 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 KIR2DL5BA0A0G2JPC4 375 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 PEX7O00628 323 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 HLA-DMBP28068 263 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 LINC01551Q86U37 167 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 KIR2DL5AQ8N109 375 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 LINC00482Q8N8I6 264 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 MS4A6AQ9H2W1 248 aa10.44□□□□□ -0.74
CDK5RAP3-219ENST00000580670 M0R3E3 92 aa10.43□□□□□ -0.74
CDK5RAP3-219ENST00000580670 SOCS3O14543 225 aa10.43□□□□□ -0.74
CDK5RAP3-219ENST00000580670 DEFB114Q30KQ6 69 aa10.43□□□□□ -0.74
CDK5RAP3-219ENST00000580670 WFDC3Q8IUB2 231 aa10.43□□□□□ -0.74
CDK5RAP3-219ENST00000580670 RNF182Q8N6D2 247 aa10.43□□□□□ -0.74
CDK5RAP3-219ENST00000580670 DERL1Q9BUN8 251 aa10.43□□□□□ -0.74
CDK5RAP3-219ENST00000580670 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
CDK5RAP3-219ENST00000580670 SAP30O75446 220 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 PRB4P10163 310 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 CSN1S1P47710 185 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 TFPI2P48307 235 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 RBPMS2Q6ZRY4 209 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ATG101Q9BSB4 218 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 EREGO14944 169 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 TCRAP04437 139 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 SNHG12Q9BXW3 62 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 TRAPPC1Q9Y5R8 145 aa10.42□□□□□ -0.74
CDK5RAP3-219ENST00000580670 TRAV9-1A0A075B6T8 112 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ZNF705FA8MVS1 300 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 DIRC3C9JPN6 131 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 M0R143 59 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ISLRO14498 428 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ESDP10768 282 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 RAB4AP20338 218 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 PAFAH1B2P68402 229 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 CD300EQ496F6 205 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 LCN12Q6JVE5 192 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 SHISA2Q6UWI4 295 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 GOLT1AQ6ZVE7 132 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 TMEM61Q8N0U2 210 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 CLEC5AQ9NY25 188 aa10.41□□□□□ -0.74
CDK5RAP3-219ENST00000580670 ID1P41134 155 aa10.4□□□□□ -0.74
CDK5RAP3-219ENST00000580670 MRPL53Q96EL3 112 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-219ENST00000580670 LINC00479Q96M42 142 aa10.4□□□□□ -0.74
CDK5RAP3-219ENST00000580670 NAGKQ9UJ70 344 aa10.4□□□□□ -0.74
CDK5RAP3-219ENST00000580670 TRAV34A0A0B4J273 112 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 K7EQG2 157 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 PSG3Q16557 428 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 ARL6IP6Q8N6S5 226 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 K7EQM0 130 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 BTF3P20290 206 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 UBE2G1P62253 170 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 ZNF738Q8NE65 137 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 SFRP2Q96HF1 295 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 SGK494Q96LW2 274 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 COL6A5A8TX70 2615 aa10.39□□□□□ -0.75
CDK5RAP3-219ENST00000580670 IGKV2-40A0A087WW87 121 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TRAV25A0A0B4J276 109 aa10.38□□□□□ -0.75
CDK5RAP3-219ENST00000580670 PRAC2D3DTV9 90 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms