RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 IGHV3-23P01764 117 aa15.7■□□□□ 0.1
AC009041.2-204ENST00000568394 ARL17AQ8IVW1 177 aa15.7■□□□□ 0.1
AC009041.2-204ENST00000568394 MYO9AB2RTY4 2548 aa15.69■□□□□ 0.1
AC009041.2-204ENST00000568394 TMEM167AQ8TBQ9 72 aa15.69■□□□□ 0.1
AC009041.2-204ENST00000568394 DEFB104AQ8WTQ1 72 aa15.69■□□□□ 0.1
AC009041.2-204ENST00000568394 AAMDCQ9H7C9 122 aa15.69■□□□□ 0.1
AC009041.2-204ENST00000568394 TRAV40A0A0B4J280 105 aa15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 FAM104BQ5XKR9 115 aa15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 GAS8-AS1O95177 125 aa15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 UFC1Q9Y3C8 167 aa15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 FSTL3O95633 263 aa15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 CCDC144NLQ6NUI1 221 aa15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 SPAG8Q99932 426 aaPredicted RBP15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 DYNLRB1Q9NP97 96 aa15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 NGBQ9NPG2 151 aa15.68■□□□□ 0.1
AC009041.2-204ENST00000568394 GRNP28799 593 aaKnown RBP15.67■□□□□ 0.1
AC009041.2-204ENST00000568394 CRIP1P50238 77 aa15.67■□□□□ 0.1
AC009041.2-204ENST00000568394 GAGE13Q4V321 117 aa15.67■□□□□ 0.1
AC009041.2-204ENST00000568394 TRBV25-1A0A075B6N4 114 aa15.67■□□□□ 0.1
AC009041.2-204ENST00000568394 IGHV1-46P01743 117 aa15.67■□□□□ 0.1
AC009041.2-204ENST00000568394 SCNM1Q9BWG6 230 aa15.67■□□□□ 0.1
AC009041.2-204ENST00000568394 SMIM17P0DL12 118 aa15.66■□□□□ 0.1
AC009041.2-204ENST00000568394 TMEM200BQ69YZ2 307 aa15.66■□□□□ 0.1
AC009041.2-204ENST00000568394 THAP8Q8NA92 274 aa15.66■□□□□ 0.1
AC009041.2-204ENST00000568394 MAP1LC3AQ9H492 121 aa15.66■□□□□ 0.1
AC009041.2-204ENST00000568394 SH2D1AO60880 128 aa15.66■□□□□ 0.1
AC009041.2-204ENST00000568394 TMEM8BA6NDV4 472 aa15.66■□□□□ 0.1
AC009041.2-204ENST00000568394 IGKCP01834 107 aa15.66■□□□□ 0.1
AC009041.2-204ENST00000568394 TCF15Q12870 199 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 TRGV9Q99603 122 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 H3BVH4 76 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 BSPH1Q075Z2 132 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 CR1LQ2VPA4 569 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 C20orf78Q9BR46 151 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 J3KRW8 73 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 NDUFS8O00217 210 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 IGLV2-11P01706 119 aa15.65■□□□□ 0.1
AC009041.2-204ENST00000568394 APOMO95445 188 aa15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 TMEM158Q8WZ71 300 aa15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 SRSF8Q9BRL6 282 aaKnown RBP15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 GEMIN7Q9H840 131 aaKnown RBP15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 SLC25A15Q9Y619 301 aa15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 NDUFB3O43676 98 aa15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 CRYBA4P53673 196 aa15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 ZNF833PQ6ZTB9 187 aa15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 CYSLTR1Q9Y271 337 aa15.64■□□□□ 0.09
AC009041.2-204ENST00000568394 PRRG2O14669 202 aa15.63■□□□□ 0.09
AC009041.2-204ENST00000568394 LYPD2Q6UXB3 125 aa15.63■□□□□ 0.09
AC009041.2-204ENST00000568394 ASCL5Q7RTU5 278 aa15.63■□□□□ 0.09
AC009041.2-204ENST00000568394 LINC00312Q9Y6C7 94 aa15.63■□□□□ 0.09
AC009041.2-204ENST00000568394 IGHV3OR16-13A0A075B7E8 117 aa15.63■□□□□ 0.09
AC009041.2-204ENST00000568394 IGHV3-74A0A0B4J1X5 117 aa15.63■□□□□ 0.09
AC009041.2-204ENST00000568394 GLRXP35754 106 aa15.62■□□□□ 0.09
AC009041.2-204ENST00000568394 IGLL5B9A064 214 aa15.62■□□□□ 0.09
AC009041.2-204ENST00000568394 PIP4P1Q86T03 277 aa15.62■□□□□ 0.09
AC009041.2-204ENST00000568394 TTC9CQ8N5M4 171 aa15.62■□□□□ 0.09
AC009041.2-204ENST00000568394 HES1Q14469 280 aa15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 SYT8Q8NBV8 401 aa15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 SPANXB1Q9NS25 103 aaPredicted RBP15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 TRBV19A0A075B6N1 114 aa15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 LHBP01229 141 aa15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 CEND1Q8N111 149 aa15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 PRSS33Q8NF86 280 aa15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 HLA-DMBP28068 263 aa15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 PSMB2P49721 201 aa15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 MRPL35Q9NZE8 188 aaKnown RBP15.61■□□□□ 0.09
AC009041.2-204ENST00000568394 A0A0G2JNJ9 132 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 ZNF785A8K8V0 405 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 MRPL16Q9NX20 251 aaKnown RBP15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 Q9UFV3 132 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 TRAV26-2A0A0B4J265 109 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 DPM2O94777 84 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 CD40P25942 277 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 IGHG3P01860 377 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 SPINK8P0C7L1 97 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 ARL3P36405 182 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 SCGB1D4Q6XE38 83 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 MYOZ3Q8TDC0 251 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 RPEQ96AT9 228 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 PLSCR4Q9NRQ2 329 aa15.6■□□□□ 0.09
AC009041.2-204ENST00000568394 SIVA1O15304 175 aa15.59■□□□□ 0.09
AC009041.2-204ENST00000568394 C12orf74Q32Q52 190 aa15.59■□□□□ 0.09
AC009041.2-204ENST00000568394 FOXI2Q6ZQN5 318 aa15.59■□□□□ 0.09
AC009041.2-204ENST00000568394 MAPKAPK5-AS1Q8N8E1 139 aa15.59■□□□□ 0.09
AC009041.2-204ENST00000568394 IGHV3-66A0A0C4DH42 116 aa15.59■□□□□ 0.09
AC009041.2-204ENST00000568394 EGR2P11161 476 aaPredicted RBP15.59■□□□□ 0.09
AC009041.2-204ENST00000568394 GLMPQ8WWB7 406 aa15.59■□□□□ 0.09
AC009041.2-204ENST00000568394 IGLV1-44P01699 117 aa15.58■□□□□ 0.09
AC009041.2-204ENST00000568394 EFNA4P52798 201 aa15.58■□□□□ 0.09
AC009041.2-204ENST00000568394 PTH2Q96A98 100 aa15.58■□□□□ 0.09
AC009041.2-204ENST00000568394 HIF1ANQ9NWT6 349 aa15.58■□□□□ 0.09
AC009041.2-204ENST00000568394 IGLV2-23P01705 113 aa15.58■□□□□ 0.08
AC009041.2-204ENST00000568394 SRSF9Q13242 221 aaKnown RBP eCLIP15.58■□□□□ 0.08
AC009041.2-204ENST00000568394 RNF125Q96EQ8 232 aa15.58■□□□□ 0.08
AC009041.2-204ENST00000568394 ANXA2RQ3ZCQ2 193 aa15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 A0A1B0GW15 77 aa15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 NCBP2LA6PVI3 153 aaKnown RBP15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 F8W1H4 67 aa15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 SPRY2O43597 315 aa15.57■□□□□ 0.08
AC009041.2-204ENST00000568394 Q6AWC8 147 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms