RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 ZSWIM8A7E2V4 1837 aa1.5□□□□□ -2.17
TCF4-239ENST00000568186 CNTLNQ9NXG0 1405 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 COL4A2P08572 1712 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 EML6Q6ZMW3 1958 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 LOC100130705A0A1B0GUX0 176 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 APODP05090 189 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 IGKV4-1P06312 121 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 BRS3P32247 399 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 GUCA1AP43080 201 aaPredicted RBP1.49□□□□□ -2.17
TCF4-239ENST00000568186 CIRBPQ14011 172 aaKnown RBP1.49□□□□□ -2.17
TCF4-239ENST00000568186 C2orf82Q6UX34 121 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 BRD3OSQ6XYD6 125 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 OR5AK2Q8NH90 309 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 SDF2Q99470 211 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 NABP2Q9BQ15 211 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 COA4Q9NYJ1 87 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 DNAJC15Q9Y5T4 150 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 SOX21Q9Y651 276 aaPredicted RBP1.49□□□□□ -2.17
TCF4-239ENST00000568186 CHCHD2Q9Y6H1 151 aaPredicted RBP1.49□□□□□ -2.17
TCF4-239ENST00000568186 RGS12O14924 1447 aa1.49□□□□□ -2.17
TCF4-239ENST00000568186 GREB1Q4ZG55 1949 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 SBF1O95248 1867 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 CCDC88AQ3V6T2 1871 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 TRAV14DV4A0A0A6YYC5 116 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 TRAV10A0A0B4J240 114 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 SPAARA0A1B0GVQ0 90 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 M0R129 80 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 CORTO00230 105 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 ERC2-IT1O76042 136 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 MRPS10P82664 201 aaKnown RBP1.48□□□□□ -2.17
TCF4-239ENST00000568186 ASB16-AS1Q495Z4 193 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 CCSMST1Q4G0I0 132 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 C1orf137Q5JT78 98 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 SCIMPQ6UWF3 145 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 IZUMO2Q6UXV1 221 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 ZNF833PQ6ZTB9 187 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 FP248Q71RG6 208 aaPredicted RBP1.48□□□□□ -2.17
TCF4-239ENST00000568186 CLECL1Q8IZS7 167 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.48□□□□□ -2.17
TCF4-239ENST00000568186 Q96M85 177 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 PDCD10Q9BUL8 212 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 METTL1Q9UBP6 276 aaKnown RBP1.48□□□□□ -2.17
TCF4-239ENST00000568186 ADAMTS7Q9UKP4 1686 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 MYO16Q9Y6X6 1858 aa1.48□□□□□ -2.17
TCF4-239ENST00000568186 FOCADQ5VW36 1801 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 SCN9AQ15858 1988 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 A0A0G2JMM0 328 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 PNMA8CA0A1B0GUJ8 204 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 A0A1W2PPB8 328 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 KIR3DP1A8MWS1 328 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 C5orf67F2Z3F1 127 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 CD3DP04234 171 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 CD14P08571 375 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 ETV6P41212 452 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 RBP2P50120 134 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 PCBD1P61457 104 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 CLLU1Q5K131 121 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 KRTAP26-1Q6PEX3 210 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 OR5AS1Q8N127 324 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 LINC00269Q8N2A0 174 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 TCTEX1D1Q8N7M0 179 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 C4orf3Q8WVX3 66 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 PSMG3Q9BT73 122 aaPredicted RBP1.47□□□□□ -2.17
TCF4-239ENST00000568186 CST11Q9H112 138 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 SLC35B3Q9H1N7 401 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 SCN3BQ9NY72 215 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 CCDC167Q9P0B6 97 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 LSM2Q9Y333 95 aaKnown RBP1.47□□□□□ -2.17
TCF4-239ENST00000568186 NAIPQ13075 1403 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 SCRIBQ14160 1630 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 TRPM6Q9BX84 2022 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 PRR14LQ5THK1 2151 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 MALRD1Q5VYJ5 2156 aa1.47□□□□□ -2.17
TCF4-239ENST00000568186 CDK5RAP2Q96SN8 1893 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 TRBV20-1A0A075B6N2 111 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 C20orf202A1L168 122 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 BBIP1A8MTZ0 92 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 J3QRE1 110 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 CDC42EP2O14613 210 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 CXCL8P10145 99 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 FGF7P21781 194 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 CKS2P33552 79 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 CNBPP62633 177 aaKnown RBP1.46□□□□□ -2.18
TCF4-239ENST00000568186 COA5Q86WW8 74 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 Q8N2B8 174 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 C10orf111Q8N326 155 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 OTOSQ8NHW6 89 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 PP6455Q8WZ26 134 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 PPP3R2Q96LZ3 170 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 BOKQ9UMX3 212 aaPredicted RBP1.46□□□□□ -2.18
TCF4-239ENST00000568186 MPC1Q9Y5U8 109 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 SHROOM3Q8TF72 1996 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 VPS8Q8N3P4 1428 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 STRCQ7RTU9 1775 aa1.46□□□□□ -2.18
TCF4-239ENST00000568186 POLEQ07864 2286 aa1.45□□□□□ -2.18
TCF4-239ENST00000568186 C3orf85A0A1B0GTC6 90 aa1.45□□□□□ -2.18
TCF4-239ENST00000568186 A6NN06 94 aa1.45□□□□□ -2.18
TCF4-239ENST00000568186 YPEL1O60688 119 aa1.45□□□□□ -2.18
TCF4-239ENST00000568186 RBP4P02753 201 aa1.45□□□□□ -2.18
TCF4-239ENST00000568186 S100A8P05109 93 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms