RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 YTHDF2Q9Y5A9 579 aaKnown RBP19■□□□□ 0.63
NME3-208ENST00000565379 K7EQM0 130 aa18.99■□□□□ 0.63
NME3-208ENST00000565379 IFNA1P01562 189 aa18.99■□□□□ 0.63
NME3-208ENST00000565379 ZNF705DP0CH99 300 aaPredicted RBP18.99■□□□□ 0.63
NME3-208ENST00000565379 ZNF705BP0CI00 300 aaPredicted RBP18.99■□□□□ 0.63
NME3-208ENST00000565379 TAGLN2P37802 199 aaKnown RBP18.99■□□□□ 0.63
NME3-208ENST00000565379 C9orf47Q6ZRZ4 202 aa18.99■□□□□ 0.63
NME3-208ENST00000565379 TXNDC17Q9BRA2 123 aa18.99■□□□□ 0.63
NME3-208ENST00000565379 CA1P00915 261 aaPredicted RBP18.98■□□□□ 0.63
NME3-208ENST00000565379 IGKV3-20P01619 116 aa18.98■□□□□ 0.63
NME3-208ENST00000565379 TMEM78Q5T7P6 136 aa18.98■□□□□ 0.63
NME3-208ENST00000565379 LYPD6BQ8NI32 183 aa18.98■□□□□ 0.63
NME3-208ENST00000565379 EDA2RQ9HAV5 297 aa18.98■□□□□ 0.63
NME3-208ENST00000565379 EPDR1Q9UM22 224 aa18.98■□□□□ 0.63
NME3-208ENST00000565379 FBLL1A6NHQ2 334 aaKnown RBP18.97■□□□□ 0.63
NME3-208ENST00000565379 F6UZH7 168 aa18.97■□□□□ 0.63
NME3-208ENST00000565379 PAGE4O60829 102 aa18.97■□□□□ 0.63
NME3-208ENST00000565379 TSPOP30536 169 aa18.97■□□□□ 0.63
NME3-208ENST00000565379 CST9LP1Q5W188 147 aa18.97■□□□□ 0.63
NME3-208ENST00000565379 ZFAND6Q6FIF0 208 aa18.97■□□□□ 0.63
NME3-208ENST00000565379 AMTNQ6UX39 209 aa18.97■□□□□ 0.63
NME3-208ENST00000565379 HIST1H2BAQ96A08 127 aa18.97■□□□□ 0.63
NME3-208ENST00000565379 SPATA25Q9BR10 227 aa18.97■□□□□ 0.63
NME3-208ENST00000565379 TRBV7-9A0A0J9YWB2 115 aa18.96■□□□□ 0.63
NME3-208ENST00000565379 TCRAP04437 139 aa18.96■□□□□ 0.63
NME3-208ENST00000565379 CCL20P78556 96 aa18.96■□□□□ 0.63
NME3-208ENST00000565379 ATG101Q9BSB4 218 aa18.96■□□□□ 0.63
NME3-208ENST00000565379 GNG13Q9P2W3 67 aa18.96■□□□□ 0.63
NME3-208ENST00000565379 TP53TG1Q9Y2A0 90 aa18.96■□□□□ 0.63
NME3-208ENST00000565379 AGRNO00468 2067 aa18.96■□□□□ 0.63
NME3-208ENST00000565379 IGKV2-40A0A087WW87 121 aaPredicted RBP18.95■□□□□ 0.62
NME3-208ENST00000565379 IGKV2D-40P01614 121 aaPredicted RBP18.95■□□□□ 0.62
NME3-208ENST00000565379 CCDC28AQ8IWP9 274 aa18.95■□□□□ 0.62
NME3-208ENST00000565379 AGPAT4-IT1Q9H0P7 198 aa18.95■□□□□ 0.62
NME3-208ENST00000565379 LEPP41159 167 aa18.94■□□□□ 0.62
NME3-208ENST00000565379 GOLT1AQ6ZVE7 132 aa18.94■□□□□ 0.62
NME3-208ENST00000565379 CYB561D1Q8N8Q1 229 aa18.94■□□□□ 0.62
NME3-208ENST00000565379 RPH3ALQ9UNE2 315 aa18.94■□□□□ 0.62
NME3-208ENST00000565379 LENEPQ9Y5L5 61 aa18.94■□□□□ 0.62
NME3-208ENST00000565379 NMBP08949 121 aa18.93■□□□□ 0.62
NME3-208ENST00000565379 GIG44P09565 113 aaPredicted RBP18.93■□□□□ 0.62
NME3-208ENST00000565379 CT45A10P0DMU9 189 aa18.93■□□□□ 0.62
NME3-208ENST00000565379 CDKN1BP46527 198 aa18.93■□□□□ 0.62
NME3-208ENST00000565379 ZNF138P52744 262 aa18.93■□□□□ 0.62
NME3-208ENST00000565379 VGLL1Q99990 258 aa18.93■□□□□ 0.62
NME3-208ENST00000565379 SLC35B3Q9H1N7 401 aa18.93■□□□□ 0.62
NME3-208ENST00000565379 GNG5P63218 68 aa18.92■□□□□ 0.62
NME3-208ENST00000565379 ERCC8Q13216 396 aa18.92■□□□□ 0.62
NME3-208ENST00000565379 ZNF492Q9P255 531 aa18.92■□□□□ 0.62
NME3-208ENST00000565379 C11orf94C9JXX5 98 aa18.91■□□□□ 0.62
NME3-208ENST00000565379 PEX7O00628 323 aa18.91■□□□□ 0.62
NME3-208ENST00000565379 ZNF767PQ75MW2 155 aa18.91■□□□□ 0.62
NME3-208ENST00000565379 TMEM75Q8N9X5 138 aa18.91■□□□□ 0.62
NME3-208ENST00000565379 RNF183Q96D59 192 aa18.91■□□□□ 0.62
NME3-208ENST00000565379 FAM19A4Q96LR4 140 aa18.91■□□□□ 0.62
NME3-208ENST00000565379 LYSTQ99698 3801 aa18.9■□□□□ 0.62
NME3-208ENST00000565379 LCE6AA0A183 80 aa18.9■□□□□ 0.62
NME3-208ENST00000565379 PRB4P10163 310 aaPredicted RBP18.9■□□□□ 0.62
NME3-208ENST00000565379 BCL2P10415 239 aa18.9■□□□□ 0.62
NME3-208ENST00000565379 ATP5G3P48201 142 aa18.9■□□□□ 0.62
NME3-208ENST00000565379 SPINK13Q1W4C9 94 aa18.9■□□□□ 0.62
NME3-208ENST00000565379 IGF2BP2-AS1Q96M15 143 aa18.9■□□□□ 0.62
NME3-208ENST00000565379 XCL2Q9UBD3 114 aa18.9■□□□□ 0.62
NME3-208ENST00000565379 VAX2Q9UIW0 290 aa18.9■□□□□ 0.62
NME3-208ENST00000565379 SPRY2O43597 315 aa18.89■□□□□ 0.61
NME3-208ENST00000565379 CRISP2P16562 243 aa18.89■□□□□ 0.61
NME3-208ENST00000565379 RAB14P61106 215 aa18.89■□□□□ 0.61
NME3-208ENST00000565379 DEFB135Q30KP9 77 aa18.89■□□□□ 0.61
NME3-208ENST00000565379 M0R2Z0 102 aa18.88■□□□□ 0.61
NME3-208ENST00000565379 INSP01308 110 aa18.88■□□□□ 0.61
NME3-208ENST00000565379 FXYD7P58549 80 aa18.88■□□□□ 0.61
NME3-208ENST00000565379 MEF2BQ02080 365 aaPredicted RBP18.88■□□□□ 0.61
NME3-208ENST00000565379 CSNK1G2-AS1Q8NCQ2 148 aa18.88■□□□□ 0.61
NME3-208ENST00000565379 C20orf144Q9BQM9 153 aa18.88■□□□□ 0.61
NME3-208ENST00000565379 PLECQ15149 4684 aaKnown RBP18.87■□□□□ 0.61
NME3-208ENST00000565379 PDE6DO43924 150 aa18.87■□□□□ 0.61
NME3-208ENST00000565379 S100A9P06702 114 aaKnown RBP18.87■□□□□ 0.61
NME3-208ENST00000565379 NDFIP1Q9BT67 221 aa18.87■□□□□ 0.61
NME3-208ENST00000565379 GOLT1BQ9Y3E0 138 aa18.87■□□□□ 0.61
NME3-208ENST00000565379 DNAH1Q9P2D7 4330 aa18.86■□□□□ 0.61
NME3-208ENST00000565379 OVOL2Q9BRP0 275 aa18.86■□□□□ 0.61
NME3-208ENST00000565379 PSG8Q9UQ74 426 aa18.86■□□□□ 0.61
NME3-208ENST00000565379 KLLNB2CW77 178 aa18.85■□□□□ 0.61
NME3-208ENST00000565379 CRXO43186 299 aaPredicted RBP18.85■□□□□ 0.61
NME3-208ENST00000565379 FLI1Q01543 452 aaPredicted RBP18.85■□□□□ 0.61
NME3-208ENST00000565379 TMEM256Q8N2U0 113 aa18.85■□□□□ 0.61
NME3-208ENST00000565379 FMC1Q96HJ9 113 aa18.85■□□□□ 0.61
NME3-208ENST00000565379 KLF12Q9Y4X4 402 aa18.85■□□□□ 0.61
NME3-208ENST00000565379 TRBV6-1A0A0K0K1D8 114 aa18.84■□□□□ 0.61
NME3-208ENST00000565379 LOC102723971A0A1B0GUV8 181 aa18.84■□□□□ 0.61
NME3-208ENST00000565379 RBFOX3A6NFN3 312 aa18.84■□□□□ 0.61
NME3-208ENST00000565379 AKR1C3P42330 323 aa18.84■□□□□ 0.61
NME3-208ENST00000565379 UBE2G1P62253 170 aa18.84■□□□□ 0.61
NME3-208ENST00000565379 SAPCD1Q5SSQ6 148 aa18.84■□□□□ 0.61
NME3-208ENST00000565379 Q8TAT8 98 aa18.84■□□□□ 0.61
NME3-208ENST00000565379 TRAV8-1A0A0A6YYK1 113 aa18.83■□□□□ 0.6
NME3-208ENST00000565379 NDUFS6O75380 124 aaKnown RBP18.83■□□□□ 0.6
NME3-208ENST00000565379 IGLV2-11P01706 119 aa18.83■□□□□ 0.6
NME3-208ENST00000565379 GPX1P07203 203 aa18.83■□□□□ 0.6
NME3-208ENST00000565379 C11orf52Q96A22 123 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms