RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 ARL14EPLP0DKL9 152 aa1.45□□□□□ -2.18
PCNX4-206ENST00000553513 PSG9Q00887 426 aa1.45□□□□□ -2.18
PCNX4-206ENST00000553513 ARL17AQ8IVW1 177 aa1.45□□□□□ -2.18
PCNX4-206ENST00000553513 MAFIPQ8WZ33 124 aa1.45□□□□□ -2.18
PCNX4-206ENST00000553513 ODF3Q96PU9 254 aa1.45□□□□□ -2.18
PCNX4-206ENST00000553513 OVOS2A0A0G2JMS6 1433 aa1.45□□□□□ -2.18
PCNX4-206ENST00000553513 CHD3Q12873 2000 aaKnown RBP1.44□□□□□ -2.18
PCNX4-206ENST00000553513 HBDP02042 147 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 PRB1P04280 392 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 SDC4P31431 198 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 FOXA3P55318 350 aaPredicted RBP1.44□□□□□ -2.18
PCNX4-206ENST00000553513 SMCO1Q147U7 214 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 HSD17B12Q53GQ0 312 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 OBSCN-AS1Q96MR7 158 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 CIB3Q96Q77 187 aaPredicted RBP1.44□□□□□ -2.18
PCNX4-206ENST00000553513 NIT2Q9NQR4 276 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 FKBP11Q9NYL4 201 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 GSKIPQ9P0R6 139 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 JPT1Q9UK76 154 aa1.44□□□□□ -2.18
PCNX4-206ENST00000553513 ZFC3H1O60293 1989 aaKnown RBP1.44□□□□□ -2.18
PCNX4-206ENST00000553513 FREM3P0C091 2139 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 FHAD1B1AJZ9 1412 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 UQCRQO14949 82 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 KLF7O75840 302 aaPredicted RBP1.43□□□□□ -2.18
PCNX4-206ENST00000553513 TNFSF15O95150 251 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 OR2H2O95918 312 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 PPYP01298 95 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 HIST1H1BP16401 226 aaKnown RBP1.43□□□□□ -2.18
PCNX4-206ENST00000553513 CKS2P33552 79 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 BLCAPP62952 87 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 MIR22HGQ0VDD5 57 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 NEDD8Q15843 81 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 C3orf62Q6ZUJ4 267 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 PLPP5Q8NEB5 264 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 CCL4L1Q8NHW4 92 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 SMIM7Q9BQ49 75 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 WFDC10AQ9H1F0 79 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 TAF9BQ9HBM6 251 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 KIAA1549Q9HCM3 1950 aa1.43□□□□□ -2.18
PCNX4-206ENST00000553513 TNRC6AQ8NDV7 1962 aaKnown RBP1.42□□□□□ -2.18
PCNX4-206ENST00000553513 TRAV23DV6A0A075B6W5 121 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 LOC105371267A0A1B0GV96 52 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 C9JAW5 83 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 JMJD7-PLA2G4BH0Y9G9 81 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 SCTP09683 121 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 DNAJB13P59910 316 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 PCBD1P61457 104 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 FOXI2Q6ZQN5 318 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 NAT14Q8WUY8 206 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 CRCT1Q9UGL9 99 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 BOKQ9UMX3 212 aaPredicted RBP1.42□□□□□ -2.18
PCNX4-206ENST00000553513 HIGD1AQ9Y241 93 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 MED23Q9ULK4 1368 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 TCOF1Q13428 1488 aaKnown RBP1.42□□□□□ -2.18
PCNX4-206ENST00000553513 LAMB2P55268 1798 aa1.42□□□□□ -2.18
PCNX4-206ENST00000553513 DSPPQ9NZW4 1301 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 TANC2Q9HCD6 1990 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 PTPRFP10586 1907 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.41□□□□□ -2.18
PCNX4-206ENST00000553513 PNMA8CA0A1B0GUJ8 204 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 EDF1O60869 148 aaKnown RBP1.41□□□□□ -2.18
PCNX4-206ENST00000553513 SLC25A4P12235 298 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 SPRNQ5BIV9 151 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 LINC00299Q6ZSB3 139 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 PSMF1Q92530 271 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 ARHGEF10O15013 1369 aa1.41□□□□□ -2.18
PCNX4-206ENST00000553513 TNRC6BQ9UPQ9 1833 aaKnown RBP1.4□□□□□ -2.18
PCNX4-206ENST00000553513 PRRC2BQ5JSZ5 2229 aaKnown RBP1.4□□□□□ -2.18
PCNX4-206ENST00000553513 FER1L6Q2WGJ9 1857 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 FRMPD1Q5SYB0 1578 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 CECR2Q9BXF3 1484 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 IFITM5A6NNB3 132 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 J3QR89 54 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 ARPC5O15511 151 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 MT-ND4LP03901 98 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 TCRAP04437 139 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 CKS1BP61024 79 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 DEFB115Q30KQ5 88 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 SPATA45Q537H7 98 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 TMEM244Q5VVB8 128 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 KRTAP26-1Q6PEX3 210 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 LINC00269Q8N2A0 174 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 C5orf17Q8NAS9 161 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 NABP2Q9BQ15 211 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 BANF2Q9H503 90 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 MPC1Q9Y5U8 109 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 POLEQ07864 2286 aa1.4□□□□□ -2.19
PCNX4-206ENST00000553513 MYO18AQ92614 2054 aaKnown RBP1.39□□□□□ -2.19
PCNX4-206ENST00000553513 RP1L1Q8IWN7 2480 aaPredicted RBP1.39□□□□□ -2.19
PCNX4-206ENST00000553513 IGHV1-24A0A0C4DH33 117 aa1.39□□□□□ -2.19
PCNX4-206ENST00000553513 NCR3O14931 201 aa1.39□□□□□ -2.19
PCNX4-206ENST00000553513 IGHV3-33P01772 117 aa1.39□□□□□ -2.19
PCNX4-206ENST00000553513 CCSMST1Q4G0I0 132 aa1.39□□□□□ -2.19
PCNX4-206ENST00000553513 MMGT1Q8N4V1 131 aa1.39□□□□□ -2.19
PCNX4-206ENST00000553513 OR4S1Q8NGB4 309 aa1.39□□□□□ -2.19
PCNX4-206ENST00000553513 OR8J3Q8NGG0 315 aa1.39□□□□□ -2.19
PCNX4-206ENST00000553513 RFX7Q2KHR2 1363 aa1.38□□□□□ -2.19
PCNX4-206ENST00000553513 PLXNA4Q9HCM2 1894 aa1.38□□□□□ -2.19
PCNX4-206ENST00000553513 SLC25A5P05141 298 aaKnown RBP1.38□□□□□ -2.19
PCNX4-206ENST00000553513 ARPC4P59998 168 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms