RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 GIG44P09565 113 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-221ENST00000544983 LEPP41159 167 aa8.6□□□□□ -1.03
SNHG1-221ENST00000544983 ZNF138P52744 262 aa8.6□□□□□ -1.03
SNHG1-221ENST00000544983 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
SNHG1-221ENST00000544983 CYB561D1Q8N8Q1 229 aa8.6□□□□□ -1.03
SNHG1-221ENST00000544983 LYPD6BQ8NI32 183 aa8.6□□□□□ -1.03
SNHG1-221ENST00000544983 C20orf144Q9BQM9 153 aa8.6□□□□□ -1.03
SNHG1-221ENST00000544983 AGPAT4-IT1Q9H0P7 198 aa8.6□□□□□ -1.03
SNHG1-221ENST00000544983 YTHDF2Q9Y5A9 579 aaKnown RBP8.6□□□□□ -1.03
SNHG1-221ENST00000544983 IGKV2-40A0A087WW87 121 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-221ENST00000544983 PAGE4O60829 102 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 IGKV2D-40P01614 121 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-221ENST00000544983 TCRAP04437 139 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-221ENST00000544983 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-221ENST00000544983 UBE2G2P60604 165 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 GOLT1AQ6ZVE7 132 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 CCDC28AQ8IWP9 274 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 IGF2BP2-AS1Q96M15 143 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 ASCL2Q99929 193 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 ZNF492Q9P255 531 aa8.59□□□□□ -1.03
SNHG1-221ENST00000544983 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 INSP01308 110 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 S100A9P06702 114 aaKnown RBP8.58□□□□□ -1.04
SNHG1-221ENST00000544983 CT45A10P0DMU9 189 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 CRISP2P16562 243 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 DEFB135Q30KP9 77 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 TMEM256Q8N2U0 113 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 TMEM75Q8N9X5 138 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 CSNK1G2-AS1Q8NCQ2 148 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 VGLL1Q99990 258 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 GNG13Q9P2W3 67 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 XCL2Q9UBD3 114 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 GOLT1BQ9Y3E0 138 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 COL7A1Q02388 2944 aa8.58□□□□□ -1.04
SNHG1-221ENST00000544983 A0A1B0GV50 99 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 SMIM9A6NGZ8 99 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 C11orf94C9JXX5 98 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 PEX7O00628 323 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 PDE6DO43924 150 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 NDUFS6O75380 124 aaKnown RBP8.57□□□□□ -1.04
SNHG1-221ENST00000544983 CCL20P78556 96 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 ERCC8Q13216 396 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 SPINK13Q1W4C9 94 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 FAM19A4Q96LR4 140 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 NEU1Q99519 415 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 OVOL2Q9BRP0 275 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 NDFIP1Q9BT67 221 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 VAX2Q9UIW0 290 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 RPH3ALQ9UNE2 315 aa8.57□□□□□ -1.04
SNHG1-221ENST00000544983 PRKDCP78527 4128 aaKnown RBP8.57□□□□□ -1.04
SNHG1-221ENST00000544983 KLLNB2CW77 178 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 M0R2Z0 102 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 BCL2P10415 239 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 GNG5P63218 68 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 MEF2BQ02080 365 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-221ENST00000544983 SAPCD1Q5SSQ6 148 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 ZNF705AQ6ZN79 300 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-221ENST00000544983 ZNF767PQ75MW2 155 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 FMC1Q96HJ9 113 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 RARRES2Q99969 163 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 KLF12Q9Y4X4 402 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 U3KQK5 164 aa8.56□□□□□ -1.04
SNHG1-221ENST00000544983 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
SNHG1-221ENST00000544983 TENM3Q9P273 2699 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 TRBV6-1A0A0K0K1D8 114 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 H7BYZ3 331 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 CRXO43186 299 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-221ENST00000544983 GPX1P07203 203 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 MIFP14174 115 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 RAB14P61106 215 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 FLI1Q01543 452 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-221ENST00000544983 OR11H2Q8NH07 326 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 TMEM208Q9BTX3 173 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 ZFP30Q9Y2G7 519 aa8.55□□□□□ -1.04
SNHG1-221ENST00000544983 IGLV2-11P01706 119 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 AKR1C3P42330 323 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 ATP5G3P48201 142 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 FXYD7P58549 80 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 UBE2G1P62253 170 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 ZFAND2AQ8N6M9 145 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 C11orf52Q96A22 123 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 NIPSNAP3BQ9BS92 247 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 TREM1Q9NP99 234 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 PSG8Q9UQ74 426 aa8.54□□□□□ -1.04
SNHG1-221ENST00000544983 TRAV8-1A0A0A6YYK1 113 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 C7orf71A4D174 169 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 TMEM189A5PLL7 270 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 RBFOX3A6NFN3 312 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 TAS2R60P59551 318 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 TMEM183BQ1AE95 376 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 GFI1BQ5VTD9 330 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 C1orf158Q8N1D5 194 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 Q8TAT8 98 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 C2CD4CQ8TF44 421 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 PYGO2Q9BRQ0 406 aa8.53□□□□□ -1.04
SNHG1-221ENST00000544983 RYR3Q15413 4870 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 TRAV12-2A0A075B6T6 113 aa8.52□□□□□ -1.05
SNHG1-221ENST00000544983 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 215.7 ms