RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PIEZO1Q92508 2521 aa13.52□□□□□ -0.24
USH1C-205ENST00000527020 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
USH1C-205ENST00000527020 HNRNPA3P51991 378 aaKnown RBP13.52□□□□□ -0.25
USH1C-205ENST00000527020 RPS20P60866 119 aaKnown RBP13.52□□□□□ -0.25
USH1C-205ENST00000527020 SRSF2Q01130 221 aaKnown RBP13.52□□□□□ -0.25
USH1C-205ENST00000527020 C10orf105Q8TEF2 133 aa13.52□□□□□ -0.25
USH1C-205ENST00000527020 PIMREGQ9BSJ6 248 aa13.52□□□□□ -0.25
USH1C-205ENST00000527020 AP5S1Q9NUS5 200 aa13.52□□□□□ -0.25
USH1C-205ENST00000527020 TSPOP30536 169 aa13.51□□□□□ -0.25
USH1C-205ENST00000527020 ATP5G2Q06055 141 aa13.51□□□□□ -0.25
USH1C-205ENST00000527020 FAM106AQ4KMX7 169 aa13.51□□□□□ -0.25
USH1C-205ENST00000527020 FER1L6-AS1Q8NA97 138 aa13.51□□□□□ -0.25
USH1C-205ENST00000527020 SLC50A1Q9BRV3 221 aa13.51□□□□□ -0.25
USH1C-205ENST00000527020 CACNA1AO00555 2505 aa13.51□□□□□ -0.25
USH1C-205ENST00000527020 RBAKDNA6NC62 111 aa13.51□□□□□ -0.25
USH1C-205ENST00000527020 IFI27P40305 119 aaPredicted RBP13.51□□□□□ -0.25
USH1C-205ENST00000527020 MRPL51Q4U2R6 128 aaKnown RBP13.51□□□□□ -0.25
USH1C-205ENST00000527020 MEGF9Q9H1U4 602 aa13.51□□□□□ -0.25
USH1C-205ENST00000527020 IGHV4-38-2P0DP08 117 aa13.5□□□□□ -0.25
USH1C-205ENST00000527020 IL17RELQ6ZVW7 336 aa13.5□□□□□ -0.25
USH1C-205ENST00000527020 METTL26Q96S19 204 aa13.5□□□□□ -0.25
USH1C-205ENST00000527020 CCL19Q99731 98 aa13.5□□□□□ -0.25
USH1C-205ENST00000527020 MCRIP2Q9BUT9 160 aaKnown RBP13.5□□□□□ -0.25
USH1C-205ENST00000527020 LAMTOR2Q9Y2Q5 125 aa13.5□□□□□ -0.25
USH1C-205ENST00000527020 FLNCQ14315 2725 aa13.5□□□□□ -0.25
USH1C-205ENST00000527020 A0A096LNJ9 63 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 LOXL1Q08397 574 aaPredicted RBP13.49□□□□□ -0.25
USH1C-205ENST00000527020 PET117Q6UWS5 81 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 PRSS3P2Q8NHM4 247 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 PRELID3AQ96N28 172 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 MAP1LC3CQ9BXW4 147 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 SIGLEC8Q9NYZ4 499 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 HSPB8Q9UJY1 196 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 FABP5P3A8MUU1 101 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 G0S2P27469 103 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 FA2HQ7L5A8 372 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 AGPAT4-IT1Q9H0P7 198 aa13.49□□□□□ -0.25
USH1C-205ENST00000527020 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
USH1C-205ENST00000527020 hDV102S1A0JD36 115 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 FAM223BA6NKX1 122 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 ORM1P02763 201 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 TFPI2P48307 235 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 C8orf86Q6ZUL3 223 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 FAM223AQ8IWN6 122 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 ORMDL3Q8N138 153 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 STPG4Q8N801 248 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 ZNF747Q9BV97 191 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 CNFNQ9BYD5 112 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 TP73-AS1Q9UF72 201 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 MRPS16Q9Y3D3 137 aaKnown RBP13.48□□□□□ -0.25
USH1C-205ENST00000527020 IGSF10Q6WRI0 2623 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 ZNF25P17030 456 aaPredicted RBP13.48□□□□□ -0.25
USH1C-205ENST00000527020 TWIST1Q15672 202 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 LINC01559Q495D7 138 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 ATP6V0BQ99437 205 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 MSRB1Q9NZV6 116 aa13.48□□□□□ -0.25
USH1C-205ENST00000527020 IGHV4-30-2A0A087WSY4 118 aa13.47□□□□□ -0.25
USH1C-205ENST00000527020 LOC389332A0A1B0GUA5 103 aa13.47□□□□□ -0.25
USH1C-205ENST00000527020 TRGV3P03979 118 aa13.47□□□□□ -0.25
USH1C-205ENST00000527020 LINC01545Q5VT33 79 aa13.47□□□□□ -0.25
USH1C-205ENST00000527020 TMEM191AQ9H0A3 160 aa13.47□□□□□ -0.25
USH1C-205ENST00000527020 TIMM8BQ9Y5J9 83 aaPredicted RBP13.47□□□□□ -0.25
USH1C-205ENST00000527020 SMKR1H3BMG3 65 aa13.47□□□□□ -0.25
USH1C-205ENST00000527020 COL5A1-AS1Q5SY13 56 aa13.47□□□□□ -0.25
USH1C-205ENST00000527020 C11orf21Q9P2W6 132 aa13.47□□□□□ -0.25
USH1C-205ENST00000527020 TRBV12-3P01733 135 aa13.46□□□□□ -0.25
USH1C-205ENST00000527020 IGF1P05019 195 aa13.46□□□□□ -0.25
USH1C-205ENST00000527020 OR10AG1Q8NH19 301 aa13.46□□□□□ -0.25
USH1C-205ENST00000527020 MRPL53Q96EL3 112 aaKnown RBP13.46□□□□□ -0.25
USH1C-205ENST00000527020 RNF185Q96GF1 192 aa13.46□□□□□ -0.25
USH1C-205ENST00000527020 ST20Q9HBF5 79 aa13.46□□□□□ -0.25
USH1C-205ENST00000527020 NDUFS8O00217 210 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 NPYP01303 97 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 LY6EQ16553 131 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 GLMPQ8WWB7 406 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 TMEM208Q9BTX3 173 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 CRYBG3Q68DQ2 2970 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 UTP20O75691 2785 aaKnown RBP13.45□□□□□ -0.26
USH1C-205ENST00000527020 USP9XQ93008 2570 aaPredicted RBP13.45□□□□□ -0.26
USH1C-205ENST00000527020 IGKV3D-20A0A0C4DH25 116 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 H0Y8G0 127 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 NCR2O95944 276 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 DOPEY1Q5JWR5 2465 aa13.45□□□□□ -0.26
USH1C-205ENST00000527020 PPIFP30405 207 aaKnown RBP13.44□□□□□ -0.26
USH1C-205ENST00000527020 ARL3P36405 182 aa13.44□□□□□ -0.26
USH1C-205ENST00000527020 ATP5J2P56134 94 aa13.44□□□□□ -0.26
USH1C-205ENST00000527020 CLEC2AQ6UVW9 174 aa13.44□□□□□ -0.26
USH1C-205ENST00000527020 UNQ9165/PRO28630Q6UXU0 137 aa13.44□□□□□ -0.26
USH1C-205ENST00000527020 PMCHL2Q9BQD1 86 aa13.44□□□□□ -0.26
USH1C-205ENST00000527020 SPG11Q96JI7 2443 aa13.44□□□□□ -0.26
USH1C-205ENST00000527020 A6NDX4 124 aa13.44□□□□□ -0.26
USH1C-205ENST00000527020 CKS2P33552 79 aa13.44□□□□□ -0.26
USH1C-205ENST00000527020 H3BUX3 64 aa13.43□□□□□ -0.26
USH1C-205ENST00000527020 SMAD7O15105 426 aaKnown RBP13.43□□□□□ -0.26
USH1C-205ENST00000527020 C9orf47Q6ZRZ4 202 aa13.43□□□□□ -0.26
USH1C-205ENST00000527020 GAS8-AS1O95177 125 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 IGHG2P01859 326 aa13.42□□□□□ -0.26
USH1C-205ENST00000527020 HINT1P49773 126 aaPredicted RBP13.42□□□□□ -0.26
USH1C-205ENST00000527020 HIST1H1AQ02539 215 aaPredicted RBP13.42□□□□□ -0.26
USH1C-205ENST00000527020 Q6ZQT7 251 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms