RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PHBP35232 272 aa-1.19□□□□□ -2.6
RNU6-1088P-201ENST00000516850 DCHS2Q6V1P9 2916 aa-1.19□□□□□ -2.6
RNU6-1088P-201ENST00000516850 C3orf62Q6ZUJ4 267 aa-1.19□□□□□ -2.6
RNU6-1088P-201ENST00000516850 TPRKBQ9Y3C4 175 aa-1.19□□□□□ -2.6
RNU6-1088P-201ENST00000516850 F2Z2F3 143 aa-1.2□□□□□ -2.6
RNU6-1088P-201ENST00000516850 RPP14O95059 124 aaKnown RBP-1.2□□□□□ -2.6
RNU6-1088P-201ENST00000516850 CSAG1Q6PB30 78 aa-1.2□□□□□ -2.6
RNU6-1088P-201ENST00000516850 ISOC1Q96CN7 298 aa-1.2□□□□□ -2.6
RNU6-1088P-201ENST00000516850 LLPHQ9BRT6 129 aaKnown RBP-1.2□□□□□ -2.6
RNU6-1088P-201ENST00000516850 CADP27708 2225 aa-1.2□□□□□ -2.6
RNU6-1088P-201ENST00000516850 PKD1L1Q8TDX9 2849 aa-1.21□□□□□ -2.6
RNU6-1088P-201ENST00000516850 ALMS1Q8TCU4 4167 aa-1.21□□□□□ -2.6
RNU6-1088P-201ENST00000516850 TRAV5A0A0B4J249 113 aa-1.21□□□□□ -2.6
RNU6-1088P-201ENST00000516850 BBIP1A8MTZ0 92 aa-1.21□□□□□ -2.6
RNU6-1088P-201ENST00000516850 IFNA14P01570 189 aa-1.21□□□□□ -2.6
RNU6-1088P-201ENST00000516850 SNCBQ16143 134 aa-1.21□□□□□ -2.6
RNU6-1088P-201ENST00000516850 OR4C12Q96R67 309 aa-1.21□□□□□ -2.6
RNU6-1088P-201ENST00000516850 NMNAT1Q9HAN9 279 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-1088P-201ENST00000516850 CCDC144AA2RUR9 1427 aa-1.22□□□□□ -2.6
RNU6-1088P-201ENST00000516850 A0A1W2PPB8 328 aa-1.22□□□□□ -2.6
RNU6-1088P-201ENST00000516850 KIR3DP1A8MWS1 328 aa-1.22□□□□□ -2.6
RNU6-1088P-201ENST00000516850 TAF1AQ15573 450 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-1088P-201ENST00000516850 TCTEX1D1Q8N7M0 179 aa-1.22□□□□□ -2.6
RNU6-1088P-201ENST00000516850 SIGMAR1Q99720 223 aa-1.22□□□□□ -2.6
RNU6-1088P-201ENST00000516850 MRPL36Q9P0J6 103 aaKnown RBP-1.22□□□□□ -2.6
RNU6-1088P-201ENST00000516850 DLEC1Q9Y238 1755 aa-1.22□□□□□ -2.6
RNU6-1088P-201ENST00000516850 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 C3orf85A0A1B0GTC6 90 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 IGF2P01344 180 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CEBPGP53567 150 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 COTL1Q14019 142 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 IZUMO2Q6UXV1 221 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 OR10X1Q8NGY0 326 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 OR5AK2Q8NH90 309 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 OR2J1Q9GZK6 312 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 HELZP42694 1942 aaKnown RBP-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 USP54Q70EL1 1684 aa-1.23□□□□□ -2.61
RNU6-1088P-201ENST00000516850 PTPRQQ9UMZ3 2332 aa-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 A0A0G2JMM0 328 aa-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 LYPLA2O95372 231 aa-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 RPS17P08708 135 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 LIN52Q52LA3 116 aa-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CIB3Q96Q77 187 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 FAM32AQ9Y421 112 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 ASB4Q9Y574 426 aa-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 ADGRL3Q9HAR2 1447 aa-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 KIAA1107Q9UPP5 1409 aa-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CAMSAP2Q08AD1 1489 aa-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CDK12Q9NYV4 1490 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CSMD3Q7Z407 3707 aa-1.25□□□□□ -2.61
RNU6-1088P-201ENST00000516850 ARL5CA6NH57 179 aa-1.25□□□□□ -2.61
RNU6-1088P-201ENST00000516850 TRGC2P03986 189 aa-1.25□□□□□ -2.61
RNU6-1088P-201ENST00000516850 NMBP08949 121 aa-1.25□□□□□ -2.61
RNU6-1088P-201ENST00000516850 INSL3P51460 131 aa-1.25□□□□□ -2.61
RNU6-1088P-201ENST00000516850 SPA17Q15506 151 aa-1.25□□□□□ -2.61
RNU6-1088P-201ENST00000516850 MSMO1Q15800 293 aa-1.25□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CDK13Q14004 1512 aaKnown RBP-1.25□□□□□ -2.61
RNU6-1088P-201ENST00000516850 H7BYZ3 331 aa-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CETN3O15182 167 aa-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CST7O76096 145 aa-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 MT-ND6P03923 174 aa-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 FABP4P15090 132 aa-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 RPL35P42766 123 aaKnown RBP-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 MRPS36P82909 103 aaKnown RBP-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 SCGB2B2Q4G0G5 96 aa-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 BPESC1Q9GZL8 116 aa-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 F5P12259 2224 aa-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 BLMP54132 1417 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-1088P-201ENST00000516850 TMEM30CPA0ZSE6 113 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 C5orf58C9J3I9 102 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 AIPO00170 330 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 NDUFC2O95298 119 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 TRACP01848 142 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 GLRXP35754 106 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 NCALDP61601 193 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 HBBP68871 147 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 FKBP1CQ5VVH2 108 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 TMEM229BQ8NBD8 167 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 UHRF1BP1Q6BDS2 1440 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 AKAP6Q13023 2319 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 BSNQ9UPA5 3926 aa-1.27□□□□□ -2.61
RNU6-1088P-201ENST00000516850 NHSL1Q5SYE7 1610 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 TMEM114B3SHH9 223 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 TPST1O60507 370 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 OGNP20774 298 aaKnown RBP-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 CAPZBP47756 277 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 NDUFA6P56556 154 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 NEK7Q8TDX7 302 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 DMAC1Q96GE9 116 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 MCEEQ96PE7 176 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 PKDREJQ9NTG1 2253 aa-1.28□□□□□ -2.61
RNU6-1088P-201ENST00000516850 TANC2Q9HCD6 1990 aa-1.28□□□□□ -2.62
RNU6-1088P-201ENST00000516850 CD109Q6YHK3 1445 aa-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 RTL9Q8NET4 1388 aa-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 C9JAW5 83 aa-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 APOA2P02652 100 aa-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 DNAJB13P59910 316 aa-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 HSPE1P61604 102 aaKnown RBP-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 OR8J3Q8NGG0 315 aa-1.29□□□□□ -2.62
RNU6-1088P-201ENST00000516850 COA4Q9NYJ1 87 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms