RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 ZNF562Q6V9R5 426 aa11.24□□□□□ -0.61
TRIM41-204ENST00000508930 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
TRIM41-204ENST00000508930 SCGB1A1P11684 91 aa11.24□□□□□ -0.61
TRIM41-204ENST00000508930 ATP6V0BQ99437 205 aa11.24□□□□□ -0.61
TRIM41-204ENST00000508930 RAB1BQ9H0U4 201 aa11.24□□□□□ -0.61
TRIM41-204ENST00000508930 FAM215AQ9Y5M1 114 aa11.24□□□□□ -0.61
TRIM41-204ENST00000508930 C16orf97H3BN30 126 aa11.23□□□□□ -0.61
TRIM41-204ENST00000508930 BSPH1Q075Z2 132 aa11.23□□□□□ -0.61
TRIM41-204ENST00000508930 PDE6HQ13956 83 aa11.23□□□□□ -0.61
TRIM41-204ENST00000508930 C3orf36Q3SXR2 165 aa11.23□□□□□ -0.61
TRIM41-204ENST00000508930 FOXI2Q6ZQN5 318 aa11.23□□□□□ -0.61
TRIM41-204ENST00000508930 WI2-2373I1.2A0A1W2PRP0 233 aa11.23□□□□□ -0.61
TRIM41-204ENST00000508930 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
TRIM41-204ENST00000508930 SMPXQ9UHP9 88 aa11.23□□□□□ -0.61
TRIM41-204ENST00000508930 CKS1BP61024 79 aa11.23□□□□□ -0.61
TRIM41-204ENST00000508930 FABP5P3A8MUU1 101 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 CDX4O14627 284 aaPredicted RBP11.22□□□□□ -0.61
TRIM41-204ENST00000508930 GAS8-AS1O95177 125 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 C12orf74Q32Q52 190 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 LCNL1Q6ZST4 164 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
TRIM41-204ENST00000508930 ONECUT1Q9UBC0 465 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 SPTBN4Q9H254 2564 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 BUB1B-PAK6H3BSN5 160 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 CRYGBP07316 175 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 NUP37Q8NFH4 326 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 ZGRF1Q86YA3 2104 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 CEACAM3P40198 252 aa11.22□□□□□ -0.61
TRIM41-204ENST00000508930 RALYQ9UKM9 306 aaKnown RBP11.22□□□□□ -0.61
TRIM41-204ENST00000508930 SCGB2A1O75556 95 aa11.21□□□□□ -0.61
TRIM41-204ENST00000508930 HLA-DMBP28068 263 aa11.21□□□□□ -0.61
TRIM41-204ENST00000508930 ZNF80P51504 273 aaPredicted RBP11.21□□□□□ -0.61
TRIM41-204ENST00000508930 GFRALQ6UXV0 394 aa11.21□□□□□ -0.61
TRIM41-204ENST00000508930 SPAG8Q99932 426 aaPredicted RBP11.21□□□□□ -0.61
TRIM41-204ENST00000508930 KLK15Q9H2R5 256 aa11.21□□□□□ -0.61
TRIM41-204ENST00000508930 SHISA9B4DS77 424 aa11.21□□□□□ -0.61
TRIM41-204ENST00000508930 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.21□□□□□ -0.61
TRIM41-204ENST00000508930 TIMM23O14925 209 aa11.21□□□□□ -0.61
TRIM41-204ENST00000508930 CEACAM4O75871 244 aa11.21□□□□□ -0.61
TRIM41-204ENST00000508930 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.61
TRIM41-204ENST00000508930 CACNA1BQ00975 2339 aa11.21□□□□□ -0.62
TRIM41-204ENST00000508930 E9PLD3 99 aa11.21□□□□□ -0.62
TRIM41-204ENST00000508930 RAB9AP51151 201 aa11.2□□□□□ -0.62
TRIM41-204ENST00000508930 DLX6P56179 175 aa11.2□□□□□ -0.62
TRIM41-204ENST00000508930 SFTA2Q6UW10 78 aa11.2□□□□□ -0.62
TRIM41-204ENST00000508930 AGRNO00468 2067 aa11.2□□□□□ -0.62
TRIM41-204ENST00000508930 OR11H12B2RN74 326 aa11.2□□□□□ -0.62
TRIM41-204ENST00000508930 OR11H1Q8NG94 326 aa11.2□□□□□ -0.62
TRIM41-204ENST00000508930 OR11H2Q8NH07 326 aa11.2□□□□□ -0.62
TRIM41-204ENST00000508930 TM2D2Q9BX73 214 aa11.2□□□□□ -0.62
TRIM41-204ENST00000508930 LYNX1G3V0Z9 82 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 APOMO95445 188 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 LYNX1P0DP58 116 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 ERCC8Q13216 396 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 RNASE6Q93091 150 aaKnown RBP11.19□□□□□ -0.62
TRIM41-204ENST00000508930 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 LOC107984156A0A0G2JMH3 177 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 ARL17AQ8IVW1 177 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 MAPKAPK5-AS1Q8N8E1 139 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 PRO3102Q9H379 93 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 DMDP11532 3685 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 DTX2Q86UW9 622 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 Q8N8P6 123 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 IGFBPL1Q8WX77 278 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 CYSLTR1Q9Y271 337 aa11.19□□□□□ -0.62
TRIM41-204ENST00000508930 PAX8Q06710 450 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 IGFL2Q6UWQ7 119 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 WFDC12Q8WWY7 111 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 IGLC6P0CF74 106 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 HIF1ANQ9NWT6 349 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
TRIM41-204ENST00000508930 NBR2O15453 112 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 LAGE3Q14657 143 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 CCDC144NLQ6NUI1 221 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 PIFOQ8TCI5 191 aa11.18□□□□□ -0.62
TRIM41-204ENST00000508930 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
TRIM41-204ENST00000508930 IGLV1-47P01700 117 aa11.17□□□□□ -0.62
TRIM41-204ENST00000508930 EFNA4P52798 201 aa11.17□□□□□ -0.62
TRIM41-204ENST00000508930 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
TRIM41-204ENST00000508930 PHLDA1Q8WV24 401 aaPredicted RBP11.17□□□□□ -0.62
TRIM41-204ENST00000508930 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRIM41-204ENST00000508930 MED13LQ71F56 2210 aa11.17□□□□□ -0.62
TRIM41-204ENST00000508930 ABCA4P78363 2273 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
TRIM41-204ENST00000508930 SRSF1Q07955 248 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRIM41-204ENST00000508930 IGHV3OR16-13A0A075B7E8 117 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 IGHV3-74A0A0B4J1X5 117 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 SPAARA0A1B0GVQ0 90 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 TAL2Q16559 108 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 SRSF8Q9BRL6 282 aaKnown RBP11.16□□□□□ -0.62
TRIM41-204ENST00000508930 ZMAT4Q9H898 229 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 INSL3P51460 131 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
TRIM41-204ENST00000508930 ZNF418Q8TF45 676 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms