RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SNRPD3P62318 126 aaKnown RBP1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZNF846Q147U1 533 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 ELOBQ15370 118 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 SS18Q15532 418 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 KIAA2026Q5HYC2 2103 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 C1orf134Q5TEV5 83 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 LINC01545Q5VT33 79 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 C2orf82Q6UX34 121 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 OR5AS1Q8N127 324 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 KCNRGQ8N5I3 272 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 LINC00311Q8N616 119 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 Q8N814 137 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 C9orf163Q8N9P6 203 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 CLEC2BQ92478 149 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 RAB37Q96AX2 223 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 MUCL1Q96DR8 90 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 Q96M85 177 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 SDF2Q99470 211 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 NABP2Q9BQ15 211 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 SPANXDQ9BXN6 97 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 SLC35B3Q9H1N7 401 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 CST9LQ9H4G1 147 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 FKBP11Q9NYL4 201 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 MPC1Q9Y5U8 109 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 SLIT2O94813 1529 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 FAM135AQ9P2D6 1515 aa1.14□□□□□ -2.23
HMGB1P35-201ENST00000503360 N4BP2Q86UW6 1770 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 HEATR5AQ86XA9 2040 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 MRC2Q9UBG0 1479 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 IGHV1-24A0A0C4DH33 117 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 C20orf202A1L168 122 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 C9orf170A2RU37 121 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZNF736B4DX44 427 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 ERC2-IT1O76042 136 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 CD14P08571 375 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 SMIM6P0DI80 62 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 BTG2P78543 158 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 CCSMST1Q4G0I0 132 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 MEIG1Q5JSS6 88 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 CLLU1Q5K131 121 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 HCP5Q6MZN7 132 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 ARPINQ7Z6K5 226 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZNF431Q8TF32 576 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 SFT2D1Q8WV19 159 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 C4orf3Q8WVX3 66 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 COPS9Q8WXC6 57 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 PP6455Q8WZ26 134 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 DPH3Q96FX2 82 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 PPP3R2Q96LZ3 170 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 PSMG3Q9BT73 122 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 SNRNP25Q9BV90 132 aaKnown RBP1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 CST11Q9H112 138 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 SCN3BQ9NY72 215 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 SCN9AQ15858 1988 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 CCDC88AQ3V6T2 1871 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 ARHGAP31Q2M1Z3 1444 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 MYOM3Q5VTT5 1437 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 SYNJ1O43426 1573 aa1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 EIF4G3O43432 1585 aaKnown RBP1.13□□□□□ -2.23
HMGB1P35-201ENST00000503360 UHRF1BP1LA0JNW5 1464 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 COL1A1P02452 1464 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 WDR97A6NE52 1622 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 SBF1O95248 1867 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 FANCMQ8IYD8 2048 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRAV12-2A0A075B6T6 113 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRAV10A0A0B4J240 114 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 IFITM5A6NNB3 132 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 B4DSR2 109 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 M0R2P5 195 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 HYPMO75409 117 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 CD3DP04234 171 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 RBP2P50120 134 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 ATP11AUNQ6ZP68 121 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 ATP6V0E2Q8NHE4 81 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 OTOSQ8NHW6 89 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 PSMF1Q92530 271 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 C14orf144Q96I85 54 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 CIB3Q96Q77 187 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 SMIM7Q9BQ49 75 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 NAA38Q9BRA0 125 aaKnown RBP1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 TIMM21Q9BVV7 248 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 COA4Q9NYJ1 87 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 LSM2Q9Y333 95 aaKnown RBP1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 RTEL1-TNFRSF6BF6WH68 1400 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 RGS12O14924 1447 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 FGD6Q6ZV73 1430 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZSWIM8A7E2V4 1837 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 SCN8AQ9UQD0 1980 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 CDK5RAP2Q96SN8 1893 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 MYO16Q9Y6X6 1858 aa1.12□□□□□ -2.23
HMGB1P35-201ENST00000503360 SMARCA4P51532 1647 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 MALRD1Q5VYJ5 2156 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 ATG2AQ2TAZ0 1938 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 CCNB3Q8WWL7 1395 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 COL5A1P20908 1838 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRAV14DV4A0A0A6YYC5 116 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRGV4A0A0C4DH28 118 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 LOC107984156A0A0G2JMH3 177 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 A0A0G2JQZ4 141 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms