RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 DDI1Q8WTU0 396 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 LINC00208Q96KT6 92 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 AP1S3Q96PC3 154 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 NBEAL2Q6ZNJ1 2754 aa-0.55□□□□□ -2.5
CCDC93-209ENST00000488908 DOCK4Q8N1I0 1966 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 CADP27708 2225 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 CELSR3Q9NYQ7 3312 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 CETN3O15182 167 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 RER1O15258 196 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 RPP14O95059 124 aaKnown RBP-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 TNFP01375 233 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 DIAPH2-AS1Q14236 149 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 KLK9Q2XQG4 91 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 Q5XG85 94 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 DEFB132Q7Z7B7 95 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 BTF3L4Q96K17 158 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 CCDC42Q96M95 316 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 LLPHQ9BRT6 129 aaKnown RBP-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 NMNAT1Q9HAN9 279 aaPredicted RBP-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 MRPL35Q9NZE8 188 aaKnown RBP-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 ITPR2Q14571 2701 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 CEP164Q9UPV0 1460 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 CNOT1A5YKK6 2376 aaKnown RBP-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 WNK1Q9H4A3 2382 aa-0.56□□□□□ -2.5
CCDC93-209ENST00000488908 ANKRD11Q6UB99 2663 aaPredicted RBP-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 DSPPQ9NZW4 1301 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 ITPR1Q14643 2758 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 TEX15Q9BXT5 2789 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 A0A096LNT2 108 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 TRAV5A0A0B4J249 113 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 MCRIP1C9JLW8 97 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 CRHP06850 196 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 IDO1P14902 403 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 NFYBP25208 207 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 CEBPGP53567 150 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 SNRPD3P62318 126 aaKnown RBP-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 COTL1Q14019 142 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 VMA21Q3ZAQ7 101 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 PRR15LQ9BU68 103 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 TANC1Q9C0D5 1861 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 TRPM1Q7Z4N2 1603 aa-0.57□□□□□ -2.5
CCDC93-209ENST00000488908 FAT2Q9NYQ8 4349 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 NCAPD3P42695 1498 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 HIST1H2BKO60814 126 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 ATP5HO75947 161 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 CFDP00746 253 aaPredicted RBP-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 HIST1H2BJP06899 126 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 SPRR2BP35325 72 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 TMBIM6P55061 237 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 ARPP19P56211 112 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 FXYD3Q14802 87 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 NEDD8Q15843 81 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 HACD4Q5VWC8 232 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 ZCCHC23Q6ZST2 131 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 LINC00269Q8N2A0 174 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 FAM216BQ8N7L0 139 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 C5orf56Q8N8D9 126 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 SIGMAR1Q99720 223 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 EFCAB11Q9BUY7 163 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 TMEM14BQ9NUH8 114 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 LAMA1P25391 3075 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 ESPL1Q14674 2120 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 UNC13BO14795 1591 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 NBPF19A0A087WUL8 3843 aa-0.58□□□□□ -2.5
CCDC93-209ENST00000488908 NISCHQ9Y2I1 1504 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 CTTNBP2Q8WZ74 1663 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 PCNX1Q96RV3 2341 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 FAT3Q8TDW7 4589 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 NBDYA0A0U1RRE5 68 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 A0A1W2PRS3 328 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 HIGD1CA8MV81 97 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 IFNA14P01570 189 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 KLKP1Q107X0 134 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 SPA17Q15506 151 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 SCGB2B2Q4G0G5 96 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 OR10X1Q8NGY0 326 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 CFAP53Q96M91 514 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 TPRKBQ9Y3C4 175 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 C2CD3Q4AC94 2353 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 BSNQ9UPA5 3926 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 DNAH6Q9C0G6 4158 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 ABCA13Q86UQ4 5058 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 AFDNP55196 1824 aaKnown RBP-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 DOPEY2Q9Y3R5 2298 aa-0.59□□□□□ -2.5
CCDC93-209ENST00000488908 ALMS1Q8TCU4 4167 aa-0.6□□□□□ -2.5
CCDC93-209ENST00000488908 MED13LQ71F56 2210 aa-0.6□□□□□ -2.5
CCDC93-209ENST00000488908 RIF1Q5UIP0 2472 aaKnown RBP-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 CCDC168Q8NDH2 2452 aa-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 TRPM7Q96QT4 1865 aa-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 TMEM114B3SHH9 223 aa-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 AIPO00170 330 aa-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 HMGB3O15347 200 aaKnown RBP-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 BANF1O75531 89 aa-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 CXCL1P09341 107 aa-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 PI4KAP42356 2102 aa-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 LIN52Q52LA3 116 aa-0.6□□□□□ -2.51
CCDC93-209ENST00000488908 C3orf62Q6ZUJ4 267 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms