RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 CCL4L1Q8NHW4 92 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 PSMF1Q92530 271 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 TPRKBQ9Y3C4 175 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 NISCHQ9Y2I1 1504 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 FRMPD1Q5SYB0 1578 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 ALPK3Q96L96 1907 aa2.81□□□□□ -1.96
PRPF40A-206ENST00000471167 C17orf98A8MV24 154 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 WISP3O95389 354 aaPredicted RBP2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 MT-ATP8P03928 68 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 GYPBP06028 91 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 FUT5Q11128 374 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 FOXF1Q12946 379 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 Q6ZQT7 251 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 DYNAPQ8N1N2 210 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 Q8NDZ9 215 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 RNF5Q99942 180 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 RETNLBQ9BQ08 111 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 NABP2Q9BQ15 211 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 LINC00312Q9Y6C7 94 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 SCN8AQ9UQD0 1980 aa2.8□□□□□ -1.96
PRPF40A-206ENST00000471167 ARHGAP5Q13017 1502 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 IGLV3-16A0A075B6K0 115 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 A0A096LNJ9 63 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 TRBV6-6A0A0A6YYG2 114 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 COLCA2A8K830 154 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 G3V3Q6 166 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 RPL36A-HNRNPH2H7BZ11 118 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 K7EM74 188 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 PLXNB1O43157 2135 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 COX6A1P12074 109 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 ETV6P41212 452 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 ZNF117Q03924 483 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 DEFB116Q30KQ4 102 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 CYB561D1Q8N8Q1 229 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 TMEM105Q8N8V8 129 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 C10orf105Q8TEF2 133 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 POP5Q969H6 163 aaKnown RBP2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 HYLS1Q96M11 299 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 LINC00467Q9BRT7 94 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 CYTL1Q9NRR1 136 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 NHP2Q9NX24 153 aaKnown RBP2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 TIMM9Q9Y5J7 89 aa2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 KIF26AQ9ULI4 1882 aaPredicted RBP2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 MYO5AQ9Y4I1 1855 aaKnown RBP2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 RBBP6Q7Z6E9 1792 aaKnown RBP2.79□□□□□ -1.96
PRPF40A-206ENST00000471167 ADGRL1O94910 1474 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 CCDC141Q6ZP82 1450 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 FYCO1Q9BQS8 1478 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 RIC1Q4ADV7 1423 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 SCN9AQ15858 1988 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 TRAV7A0A075B6U4 112 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 TMEM235A6NFC5 223 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 A6NN06 94 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 H3BPC8 53 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 H3BQ85 93 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 SNCGO76070 127 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 DEFA4P12838 97 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 ATP11AUNQ6ZP68 121 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 Q6ZR03 302 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 FP248Q71RG6 208 aaPredicted RBP2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 ZNF720Q7Z2F6 126 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 RPRMLQ8N4K4 120 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 OR2T35Q8NGX2 323 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 DSCR8Q96T75 97 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 ASF1BQ9NVP2 202 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 ZNF407Q9C0G0 2248 aa2.78□□□□□ -1.96
PRPF40A-206ENST00000471167 RTEL1-TNFRSF6BF6WH68 1400 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 CHD1O14646 1710 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 SPHKAPQ2M3C7 1700 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 H3BQ15 152 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 GNRH2O43555 120 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 MRPS14O60783 128 aaKnown RBP2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 NDUFB6O95139 128 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 IGLV7-43P04211 117 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 ZNF14P17017 642 aaPredicted RBP2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 FXYD2P54710 66 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 Q0VG73 95 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 PEA15Q15121 130 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 IQCJQ1A5X6 159 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 ESRGQ1W209 222 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 LGALSLQ3ZCW2 172 aaPredicted RBP2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 ASB16-AS1Q495Z4 193 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 FAM27BQ5VT28 67 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 ATP6V0E2Q8NHE4 81 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 VSTM2AQ8TAG5 236 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 SPTSSAQ969W0 71 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 LINC00052Q96N35 136 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 CST11Q9H112 138 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 NPVFQ9HCQ7 196 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 LY96Q9Y6Y9 160 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 ZFC3H1O60293 1989 aaKnown RBP2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 TANC2Q9HCD6 1990 aa2.77□□□□□ -1.97
PRPF40A-206ENST00000471167 IGHV1-24A0A0C4DH33 117 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 TRBV10-2A0A0K0K1G8 114 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 J3QLW9 94 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 IGHV3-53P01767 116 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 IL5P05113 134 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 COX7CP15954 63 aa2.76□□□□□ -1.97
PRPF40A-206ENST00000471167 ZNF22P17026 224 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms