RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 AMBPP02760 352 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 CTSGP08311 255 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 APELAP0DMC3 54 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 EGR2P11161 476 aaPredicted RBP4.39□□□□□ -1.71
HDAC8-216ENST00000470998 BMI1P35226 326 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 IER3P46695 156 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 FOXA3P55318 350 aaPredicted RBP4.39□□□□□ -1.71
HDAC8-216ENST00000470998 DLX1P56177 255 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 HBBP68871 147 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 RHOGP84095 191 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 PSG3Q16557 428 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 C15orf32Q32M92 178 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 C16orf54Q6UWD8 224 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 TMEM136Q6ZRR5 245 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 RBPMS2Q6ZRY4 209 aaKnown RBP4.39□□□□□ -1.71
HDAC8-216ENST00000470998 DYNAPQ8N1N2 210 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 BORCS7Q96B45 105 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 NDFIP1Q9BT67 221 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 FAM103A1Q9BTL3 118 aaKnown RBP4.39□□□□□ -1.71
HDAC8-216ENST00000470998 ZNF747Q9BV97 191 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 RNASE7Q9H1E1 156 aaKnown RBP4.39□□□□□ -1.71
HDAC8-216ENST00000470998 SERTAD4Q9NUC0 356 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 AURKAIP1Q9NWT8 199 aaPredicted RBP4.39□□□□□ -1.71
HDAC8-216ENST00000470998 STAB1Q9NY15 2570 aa4.39□□□□□ -1.71
HDAC8-216ENST00000470998 CUBNO60494 3623 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 TRAV41A0A0B4J266 112 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 TRAV40A0A0B4J280 105 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 A0A1B0GUS0 222 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 DIRC3C9JPN6 131 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 APCSP02743 223 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 PMCHP20382 165 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 CBLN1P23435 193 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 PKIAP61925 76 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 ATP5G2Q06055 141 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 KLF5Q13887 457 aaPredicted RBP4.38□□□□□ -1.71
HDAC8-216ENST00000470998 C19orf54Q5BKX5 351 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 GOLT1AQ6ZVE7 132 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 GATD1Q8NB37 220 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 NUP35Q8NFH5 326 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 ZNF414Q96IQ9 312 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 KCNS1Q96KK3 526 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 NOL4LQ96MY1 436 aaPredicted RBP4.38□□□□□ -1.71
HDAC8-216ENST00000470998 WWC2-AS2Q96NR7 200 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 METTL26Q96S19 204 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 NEU1Q99519 415 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 PRDM13Q9H4Q3 707 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 ESM1Q9NQ30 184 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 GSN-AS1Q9NRJ2 163 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 LENEPQ9Y5L5 61 aa4.38□□□□□ -1.71
HDAC8-216ENST00000470998 IGHV3-21A0A0B4J1V1 117 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 A0A1W2PS18 150 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 A6NDX4 124 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 OR2T8A6NH00 312 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 A8MWP6 167 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 NDUFA4O00483 81 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 BUB3O43684 328 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 IGLV2-11P01706 119 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 IGHG2P01859 326 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 RAB4BP61018 213 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 GNG5P63218 68 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 PRB3Q04118 309 aaPredicted RBP4.37□□□□□ -1.71
HDAC8-216ENST00000470998 RIGQ13278 110 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 ECSCRQ19T08 205 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
HDAC8-216ENST00000470998 KLF17Q5JT82 389 aaPredicted RBP4.37□□□□□ -1.71
HDAC8-216ENST00000470998 PRR27Q6MZM9 219 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 C19orf35Q6ZS72 473 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 MRPL52Q86TS9 123 aaKnown RBP4.37□□□□□ -1.71
HDAC8-216ENST00000470998 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 TMEM86BQ8N661 226 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 SIGLECL1Q8N7X8 197 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 NHLRC2Q8NBF2 726 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 RAX2Q96IS3 184 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 HSPB9Q9BQS6 159 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 SAMD10Q9BYL1 202 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 PPP1R14DQ9NXH3 145 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 PSG8Q9UQ74 426 aa4.37□□□□□ -1.71
HDAC8-216ENST00000470998 TRAV34A0A0B4J273 112 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 TRBV7-9A0A0J9YWB2 115 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 A0A1B0GUT8 65 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 DNAJC9-AS1A6NH13 148 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 GZMBP10144 247 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 GYPEP15421 78 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 CD24P25063 80 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 GPR183P32249 361 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 PDZD11Q5EBL8 140 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 GFI1BQ5VTD9 330 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 RUSC1-AS1Q66K80 236 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 LEMD1Q68G75 181 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 MRPL54Q6P161 138 aaKnown RBP4.36□□□□□ -1.71
HDAC8-216ENST00000470998 OR2D3Q8NGH3 330 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 CHCHD1Q96BP2 118 aaKnown RBP4.36□□□□□ -1.71
HDAC8-216ENST00000470998 LINC00479Q96M42 142 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 MS4A10Q96PG2 267 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 RPH3ALQ9UNE2 315 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 MXRA5Q9NR99 2828 aa4.36□□□□□ -1.71
HDAC8-216ENST00000470998 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.35□□□□□ -1.71
HDAC8-216ENST00000470998 C20orf202A1L168 122 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms