RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 ACACAQ13085 2346 aa11.1□□□□□ -0.63
MCF2L-218ENST00000442625 TRBV19A0A075B6N1 114 aa11.1□□□□□ -0.63
MCF2L-218ENST00000442625 FCGR2BP31994 310 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-218ENST00000442625 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
MCF2L-218ENST00000442625 RNF183Q96D59 192 aa11.1□□□□□ -0.63
MCF2L-218ENST00000442625 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
MCF2L-218ENST00000442625 IGHV3OR16-8A0A075B7F1 116 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 E7EQL1 145 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-218ENST00000442625 PVRIGQ6DKI7 326 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 SIGLEC15Q6ZMC9 328 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 RNF125Q96EQ8 232 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 ERG28Q9UKR5 140 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 CUL9Q8IWT3 2517 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 GAGE12HA6NDE8 117 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 PRRG2O14669 202 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 UFSP1Q6NVU6 142 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 ABCA4P78363 2273 aa11.09□□□□□ -0.63
MCF2L-218ENST00000442625 RIF1Q5UIP0 2472 aaKnown RBP11.09□□□□□ -0.63
MCF2L-218ENST00000442625 A0A0G2JLM5 398 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 I3L2K1 104 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 IL4P05112 153 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 HOXB4P17483 251 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-218ENST00000442625 ASCL5Q7RTU5 278 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 Q8TAT8 98 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 IGKV2-40A0A087WW87 121 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-218ENST00000442625 C9orf118A6NHY6 69 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 BUB1B-PAK6H3BSN5 160 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 IGKV2D-40P01614 121 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-218ENST00000442625 IGLV1-47P01700 117 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 TMEM75Q8N9X5 138 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 SHISA9B4DS77 424 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 NPYP01303 97 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 IGHV3-23P01764 117 aa11.08□□□□□ -0.64
MCF2L-218ENST00000442625 SEC11AP67812 179 aa11.07□□□□□ -0.64
MCF2L-218ENST00000442625 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
MCF2L-218ENST00000442625 RPEQ96AT9 228 aa11.07□□□□□ -0.64
MCF2L-218ENST00000442625 A1L4Q6 167 aa11.07□□□□□ -0.64
MCF2L-218ENST00000442625 CFHR4Q92496 578 aa11.07□□□□□ -0.64
MCF2L-218ENST00000442625 KAAG1Q9UBP8 84 aa11.07□□□□□ -0.64
MCF2L-218ENST00000442625 ZFHX2Q9C0A1 2572 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-218ENST00000442625 ZFHX3Q15911 3703 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 K7ERJ3 54 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 ZNF207O43670 478 aaKnown RBP11.06□□□□□ -0.64
MCF2L-218ENST00000442625 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 PRR30Q53SZ7 412 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-218ENST00000442625 ZNF414Q96IQ9 312 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 RALYQ9UKM9 306 aaKnown RBP11.06□□□□□ -0.64
MCF2L-218ENST00000442625 IGKV2D-26A0A0A0MRZ7 120 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 SH2D1AO60880 128 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 FAM104BQ5XKR9 115 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 ADAMTSL5Q6ZMM2 481 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 OR2K2Q8NGT1 345 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 SHANK2-AS3Q9BTD1 123 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 TMEM14CQ9P0S9 112 aa11.06□□□□□ -0.64
MCF2L-218ENST00000442625 TMEM189A5PLL7 270 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 H3BRM9 83 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 K7EIM0 57 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 PPIFP30405 207 aaKnown RBP11.05□□□□□ -0.64
MCF2L-218ENST00000442625 GFRALQ6UXV0 394 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 ZNF418Q8TF45 676 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-218ENST00000442625 SCNM1Q9BWG6 230 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 NPIPB5A8MRT5 1133 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 EVI2AP22794 236 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 CKS2P33552 79 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 ZNF80P51504 273 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-218ENST00000442625 TWIST1Q15672 202 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 ORMDL3Q8N138 153 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 IFI27L1Q96BM0 104 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 ZNF292O60281 2723 aa11.05□□□□□ -0.64
MCF2L-218ENST00000442625 A6NDN8 102 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 K7EP34 96 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 TIMM23O14925 209 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 NDUFS7O75251 213 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 CT45A10P0DMU9 189 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 GATA1P15976 413 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-218ENST00000442625 NRGNQ92686 78 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 SPCS1Q9Y6A9 102 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 H3BRN7 92 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 LY6HO94772 140 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-218ENST00000442625 GCSHP23434 173 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 SPATA25Q9BR10 227 aa11.04□□□□□ -0.64
MCF2L-218ENST00000442625 HBDP02042 147 aa11.03□□□□□ -0.64
MCF2L-218ENST00000442625 FXYD2P54710 66 aa11.03□□□□□ -0.64
MCF2L-218ENST00000442625 LGALS9BQ3B8N2 356 aa11.03□□□□□ -0.64
MCF2L-218ENST00000442625 LGALS9CQ6DKI2 356 aa11.03□□□□□ -0.64
MCF2L-218ENST00000442625 NBASA2RRP1 2371 aa11.03□□□□□ -0.64
MCF2L-218ENST00000442625 MRPS12O15235 138 aaKnown RBP11.02□□□□□ -0.64
MCF2L-218ENST00000442625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-218ENST00000442625 RPL24P83731 157 aaKnown RBP11.02□□□□□ -0.65
MCF2L-218ENST00000442625 PAX8Q06710 450 aa11.02□□□□□ -0.65
MCF2L-218ENST00000442625 VGLL1Q99990 258 aa11.02□□□□□ -0.65
MCF2L-218ENST00000442625 A0A1W2PPM0 123 aa11.01□□□□□ -0.65
MCF2L-218ENST00000442625 SMIM9A6NGZ8 99 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 967 ms