RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 SPACA4Q8TDM5 124 aa1.37□□□□□ -2.19
HMGB1P9-201ENST00000429856 CLEC2BQ92478 149 aa1.37□□□□□ -2.19
HMGB1P9-201ENST00000429856 OR4C12Q96R67 309 aa1.37□□□□□ -2.19
HMGB1P9-201ENST00000429856 NABP2Q9BQ15 211 aa1.37□□□□□ -2.19
HMGB1P9-201ENST00000429856 DNAJC15Q9Y5T4 150 aa1.37□□□□□ -2.19
HMGB1P9-201ENST00000429856 FN1P02751 2386 aaKnown RBP1.37□□□□□ -2.19
HMGB1P9-201ENST00000429856 COL1A1P02452 1464 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P9-201ENST00000429856 LAMB2P55268 1798 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 CEP192Q8TEP8 1941 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 FAM25AB3EWG3 89 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 FAM25CB3EWG5 89 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 FAM25GB3EWG6 89 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 ATP6V1G2-DDX39BF2Z307 99 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 M0R129 80 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 IFNGP01579 166 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 CCL4P13236 92 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 ZNF25P17030 456 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 S100PP25815 95 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 RPS19BP1Q86WX3 136 aaKnown RBP1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 OR5D14Q8NGL3 314 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 OR10AC1Q8NH08 325 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 RAB37Q96AX2 223 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 MUC4Q99102 2169 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 SDF2Q99470 211 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 ATG2AQ2TAZ0 1938 aa1.36□□□□□ -2.19
HMGB1P9-201ENST00000429856 RIMS1Q86UR5 1692 aaKnown RBP1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 FREM1Q5H8C1 2179 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 BAZ2BQ9UIF8 2168 aaKnown RBP1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 PTPRFP10586 1907 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 RTEL1-TNFRSF6BF6WH68 1400 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 ARHGAP31Q2M1Z3 1444 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 STRCP1A6NGW2 1772 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 KIDINS220Q9ULH0 1771 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 UNC79Q9P2D8 2635 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 LOC100130705A0A1B0GUX0 176 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 LOC107986453A0A1B0GWG9 222 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 FAM92AA1XBS5 289 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 C2orf70A6NJV1 201 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 E7EUB6 86 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 C5orf67F2Z3F1 127 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 TRACP01848 142 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 CD3DP04234 171 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 SAA1P0DJI8 122 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 HIST1H1BP16401 226 aaKnown RBP1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 DSCR4P56555 118 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 PCBD1P61457 104 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 LSM3P62310 102 aaKnown RBP1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 KRTAP6-3Q3LI67 103 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 CLLU1Q5K131 121 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 IZUMO2Q6UXV1 221 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 PSMF1Q92530 271 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 TMEM203Q969S6 136 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 C12orf57Q99622 126 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 LSM2Q9Y333 95 aaKnown RBP1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 CITO14578 2027 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 COL24A1Q17RW2 1714 aa1.35□□□□□ -2.19
HMGB1P9-201ENST00000429856 FREM3P0C091 2139 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 EML5Q05BV3 1969 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 RGS12O14924 1447 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 KDM6AO15550 1401 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 SMG6Q86US8 1419 aaKnown RBP1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 TRAV12-1A0A0B4J245 112 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 TCRBV4S1A1TA0A5B7 111 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 PLGLB1Q02325 96 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 CIRBPQ14011 172 aaKnown RBP1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 Q1T7F1 81 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 CCSMST1Q4G0I0 132 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 OCIAD2Q56VL3 154 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 CLECL1Q8IZS7 167 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 OR5AS1Q8N127 324 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 LINC00269Q8N2A0 174 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 C10orf111Q8N326 155 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 FAM19A2Q8N3H0 131 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 OTOSQ8NHW6 89 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 TMEM254Q8TBM7 123 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 SFT2D1Q8WV19 159 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 MUCL1Q96DR8 90 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 CST11Q9H112 138 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 SLC35B3Q9H1N7 401 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 CST9LQ9H4G1 147 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 METTL1Q9UBP6 276 aaKnown RBP1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 GNG8Q9UK08 70 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 CHCHD2Q9Y6H1 151 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 PXDNLA1KZ92 1463 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 GRIN2AQ12879 1464 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 USP54Q70EL1 1684 aa1.34□□□□□ -2.19
HMGB1P9-201ENST00000429856 PCNX2A6NKB5 2137 aa1.34□□□□□ -2.2
HMGB1P9-201ENST00000429856 CACNA1GO43497 2377 aa1.34□□□□□ -2.2
HMGB1P9-201ENST00000429856 CHD3Q12873 2000 aaKnown RBP1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 COL5A1P20908 1838 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 ERBINQ96RT1 1412 aa1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 TRBV20-1A0A075B6N2 111 aa1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 A0A087WSZ3 146 aa1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 TRAV10A0A0B4J240 114 aa1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 TRGV4A0A0C4DH28 118 aa1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 LOC107984156A0A0G2JMH3 177 aa1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 A0A0G2JMM0 328 aa1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 A0A1W2PPB8 328 aa1.33□□□□□ -2.2
HMGB1P9-201ENST00000429856 C9orf170A2RU37 121 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms