RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATAD5Q96QE3 1844 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 MYH1P12882 1939 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 ALPK3Q96L96 1907 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 DOCK6Q96HP0 2047 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABCC2Q92887 1545 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRBV20OR9-2A0A075B6H5 130 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRAV12-2A0A075B6T6 113 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 C3orf85A0A1B0GTC6 90 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 TPT1P13693 172 aaKnown RBP2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 TAS2R45P59539 299 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 Q6ZQT7 251 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 LCA10Q71F78 164 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 ATP6V0E2Q8NHE4 81 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 MRPL30Q8TCC3 161 aaKnown RBP2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 C10orf105Q8TEF2 133 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 MUCL1Q96DR8 90 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 RMI2Q96E14 147 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 S100A16Q96FQ6 103 aaKnown RBP2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 IMUPQ9GZP8 106 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 AK3Q9UIJ7 227 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 PHLDA3Q9Y5J5 127 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 LAMC1P11047 1609 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 PRR14LQ5THK1 2151 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABCA8O94911 1581 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 GLI2P10070 1586 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 MYH6P13533 1939 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 CEP170Q5SW79 1584 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 DENND4CQ5VZ89 1909 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 LAMC3Q9Y6N6 1575 aa2.7□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGKV1-9A0A0C4DH69 117 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 MUC21A0A140T8X8 626 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 H3BMG7 143 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 BUB1B-PAK6H3BSN5 160 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR1I1O60431 355 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGLV3-27P01718 113 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 C1QAP02745 245 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 LINC00032P0C843 101 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 POLR2JP52435 117 aaKnown RBP2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 SS18Q15532 418 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 HMGN3Q15651 99 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 LGALS9BQ3B8N2 356 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 SPATA45Q537H7 98 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 Q56UQ5 140 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 LGALS9CQ6DKI2 356 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 TEN1Q86WV5 123 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 H1FXQ92522 213 aaKnown RBP2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 POP5Q969H6 163 aaKnown RBP2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 PRELID3AQ96N28 172 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 EIF5A2Q9GZV4 153 aaKnown RBP2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 ST20Q9HBF5 79 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 NDUFB11Q9NX14 153 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR5V1Q9UGF6 321 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 DNAJC15Q9Y5T4 150 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 SPCS1Q9Y6A9 102 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 U3KQK5 164 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 PLXNC1O60486 1568 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 ROBO1Q9Y6N7 1651 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 STRCQ7RTU9 1775 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 DSCAML1Q8TD84 2053 aa2.69□□□□□ -1.98
HMGB1P13-201ENST00000406019 SEC16AO15027 2179 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABCC6O95255 1503 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 RNF17Q9BXT8 1623 aaKnown RBP2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRAV9-1A0A075B6T8 112 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 MCRIP1C9JLW8 97 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 F8W1H4 67 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 H3BRM9 83 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 H3BT86 120 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 GNGT2O14610 69 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 PLA2G10O15496 165 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SYNGR2O43760 224 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TCL1BO95988 128 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SOD1P00441 154 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGHV3-53P01767 116 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRACP01848 142 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 RBP4P02753 201 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SFTA3P0C7M3 94 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 HLA-DRB4P13762 266 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 CBLN1P23435 193 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 WFDC2Q14508 124 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 TMEM91Q6ZNR0 172 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 BPIFA4PQ86YQ2 179 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 GPHB5Q86YW7 130 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 Q8N2B8 174 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR10AG1Q8NH19 301 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 VSTM2AQ8TAG5 236 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 WFDC5Q8TCV5 224 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 NAA60Q9H7X0 242 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 FIS1Q9Y3D6 152 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SERP1Q9Y6X1 66 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 HLA-DRB4X5D2U9 266 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 PLIN4Q96Q06 1357 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 CFTRP13569 1480 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 CDK12Q9NYV4 1490 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 SBF2Q86WG5 1849 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 MARF1Q9Y4F3 1742 aaKnown RBP2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 KIF14Q15058 1648 aa2.68□□□□□ -1.98
HMGB1P13-201ENST00000406019 ADGRB1O14514 1584 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 NCOA2Q15596 1464 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms