RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 FAM106AQ4KMX7 169 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 BCL6BQ8N143 479 aaPredicted RBP12.59□□□□□ -0.39
PDGFA-203ENST00000402802 MTURNQ8N3F0 131 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 ARMS2P0C7Q2 107 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 GCSHP23434 173 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 FXYD2P54710 66 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 Q86TA4 180 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 LY6G5BQ8NDX9 201 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 NPIPB3Q92617 1050 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
PDGFA-203ENST00000402802 F11RQ9Y624 299 aaKnown RBP12.59□□□□□ -0.39
PDGFA-203ENST00000402802 LOXL1Q08397 574 aaPredicted RBP12.58□□□□□ -0.4
PDGFA-203ENST00000402802 WFDC2Q14508 124 aa12.58□□□□□ -0.4
PDGFA-203ENST00000402802 C8orf46Q8TAG6 207 aa12.58□□□□□ -0.4
PDGFA-203ENST00000402802 SPAG8Q99932 426 aaPredicted RBP12.58□□□□□ -0.4
PDGFA-203ENST00000402802 NDUFA4L2Q9NRX3 87 aa12.58□□□□□ -0.4
PDGFA-203ENST00000402802 E9PLD3 99 aa12.57□□□□□ -0.4
PDGFA-203ENST00000402802 K7EQM0 130 aa12.57□□□□□ -0.4
PDGFA-203ENST00000402802 TCTAP57738 103 aa12.57□□□□□ -0.4
PDGFA-203ENST00000402802 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
PDGFA-203ENST00000402802 TNCP24821 2201 aa12.57□□□□□ -0.4
PDGFA-203ENST00000402802 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
PDGFA-203ENST00000402802 TM4SF20Q53R12 229 aa12.57□□□□□ -0.4
PDGFA-203ENST00000402802 Q9H3A6 140 aa12.57□□□□□ -0.4
PDGFA-203ENST00000402802 HBDP02042 147 aa12.56□□□□□ -0.4
PDGFA-203ENST00000402802 SAA1P0DJI8 122 aaPredicted RBP12.56□□□□□ -0.4
PDGFA-203ENST00000402802 COX6B1P14854 86 aa12.56□□□□□ -0.4
PDGFA-203ENST00000402802 CIARTQ8N365 385 aaPredicted RBP12.56□□□□□ -0.4
PDGFA-203ENST00000402802 LINC00311Q8N616 119 aa12.56□□□□□ -0.4
PDGFA-203ENST00000402802 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
PDGFA-203ENST00000402802 RITA1Q96K30 269 aa12.56□□□□□ -0.4
PDGFA-203ENST00000402802 U3KQK5 164 aa12.56□□□□□ -0.4
PDGFA-203ENST00000402802 ZNF493Q6ZR52 646 aa12.56□□□□□ -0.4
PDGFA-203ENST00000402802 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
PDGFA-203ENST00000402802 ZFHX3Q15911 3703 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.55□□□□□ -0.4
PDGFA-203ENST00000402802 IGLV1-47P01700 117 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 ATP5J2P56134 94 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 GEMIN7Q9H840 131 aaKnown RBP12.55□□□□□ -0.4
PDGFA-203ENST00000402802 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 ABCA2Q9BZC7 2435 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 TRBV6-1A0A0K0K1D8 114 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 GP9P14770 177 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 KRTAP10-9P60411 292 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 LMO4P61968 165 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 PAX8Q06710 450 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 Q6AWC8 147 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 SHISA2Q6UWI4 295 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
PDGFA-203ENST00000402802 CHAC1Q9BUX1 264 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
PDGFA-203ENST00000402802 K7ERJ3 54 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 SLC25A17O43808 307 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 ORM2P19652 201 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 ZNF502Q8TBZ5 544 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 MRPL16Q9NX20 251 aaKnown RBP12.54□□□□□ -0.4
PDGFA-203ENST00000402802 PGPEP1Q9NXJ5 209 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 LOC389332A0A1B0GUA5 103 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 BUB1B-PAK6H3BSN5 160 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 IGLV2-11P01706 119 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 SUB1P53999 127 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDGFA-203ENST00000402802 HARBI1Q96MB7 349 aa12.54□□□□□ -0.4
PDGFA-203ENST00000402802 IGLL5B9A064 214 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 ENSAO43768 121 aaKnown RBP12.53□□□□□ -0.4
PDGFA-203ENST00000402802 HOXB4P17483 251 aaPredicted RBP12.53□□□□□ -0.4
PDGFA-203ENST00000402802 ETDBQ3ZM63 59 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 HIST2H2BCQ6DN03 193 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 HCP5Q6MZN7 132 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 C8orf31Q8N9H6 132 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 HELZ2Q9BYK8 2649 aaKnown RBP12.53□□□□□ -0.4
PDGFA-203ENST00000402802 ANKRD17O75179 2603 aaKnown RBP12.53□□□□□ -0.4
PDGFA-203ENST00000402802 IGHV4-61A0A0C4DH41 118 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 D6R8Y8 96 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 SH2D6Q7Z4S9 175 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 VMO1Q7Z5L0 202 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 PRNTQ86SH4 94 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 OSR1Q8TAX0 266 aaPredicted RBP12.53□□□□□ -0.4
PDGFA-203ENST00000402802 PRELID3AQ96N28 172 aa12.53□□□□□ -0.4
PDGFA-203ENST00000402802 NHP2Q9NX24 153 aaKnown RBP12.53□□□□□ -0.4
PDGFA-203ENST00000402802 IGHV4-30-2A0A087WSY4 118 aa12.52□□□□□ -0.41
PDGFA-203ENST00000402802 TRAV8-1A0A0A6YYK1 113 aa12.52□□□□□ -0.41
PDGFA-203ENST00000402802 PLXNB1O43157 2135 aa12.52□□□□□ -0.41
PDGFA-203ENST00000402802 CNTFRP26992 372 aa12.52□□□□□ -0.41
PDGFA-203ENST00000402802 CEND1Q8N111 149 aa12.52□□□□□ -0.41
PDGFA-203ENST00000402802 ARPC1AQ92747 370 aa12.52□□□□□ -0.41
PDGFA-203ENST00000402802 DKK2Q9UBU2 259 aa12.52□□□□□ -0.41
PDGFA-203ENST00000402802 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
PDGFA-203ENST00000402802 ORMDL3Q8N138 153 aa12.51□□□□□ -0.41
PDGFA-203ENST00000402802 FLYWCH2Q96CP2 140 aaKnown RBP12.51□□□□□ -0.41
PDGFA-203ENST00000402802 TPSG1Q9NRR2 321 aa12.51□□□□□ -0.41
PDGFA-203ENST00000402802 MRPL36Q9P0J6 103 aaKnown RBP12.51□□□□□ -0.41
PDGFA-203ENST00000402802 IGHV3-48P01763 117 aa12.51□□□□□ -0.41
PDGFA-203ENST00000402802 WT1-ASQ06250 92 aa12.51□□□□□ -0.41
PDGFA-203ENST00000402802 GAGE13Q4V321 117 aa12.51□□□□□ -0.41
PDGFA-203ENST00000402802 TTC9CQ8N5M4 171 aa12.51□□□□□ -0.41
PDGFA-203ENST00000402802 ZMAT4Q9H898 229 aa12.51□□□□□ -0.41
PDGFA-203ENST00000402802 IGHV1-3A0A0C4DH29 117 aa12.5□□□□□ -0.41
PDGFA-203ENST00000402802 TSPAN13O95857 204 aa12.5□□□□□ -0.41
PDGFA-203ENST00000402802 RBP4P02753 201 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms