RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 KRTAP27-1Q3LI81 207 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 IGLV1-47P01700 117 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 IGHG2P01859 326 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 SSBP2P81877 361 aaPredicted RBP11.33□□□□□ -0.6
GABPA-202ENST00000400075 C12orf57Q99622 126 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 DENND4AQ7Z401 1863 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 TRAV9-1A0A075B6T8 112 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 WIPF2Q8TF74 440 aaPredicted RBP11.33□□□□□ -0.6
GABPA-202ENST00000400075 CGB3P0DN86 165 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 PKIAP61925 76 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 LYZL1Q6UWQ5 148 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 RMI2Q96E14 147 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
GABPA-202ENST00000400075 IGLC7A0M8Q6 106 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 LINC01549A6NIU2 74 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 TCF23Q7RTU1 214 aa11.33□□□□□ -0.6
GABPA-202ENST00000400075 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 IMMP2LQ96T52 175 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 EML6Q6ZMW3 1958 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 CDX1P47902 265 aaPredicted RBP11.32□□□□□ -0.6
GABPA-202ENST00000400075 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 PRO1933Q9H354 126 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 TNRC6AQ8NDV7 1962 aaKnown RBP11.32□□□□□ -0.6
GABPA-202ENST00000400075 TRBV19A0A075B6N1 114 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 IGHV4OR15-8A0A075B7B6 117 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 A0A087WW49 117 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 VCYO14598 125 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 PAX4O43316 350 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 APOMO95445 188 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 IGKV1-39P01597 117 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 IGKV1D-39P04432 117 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 GTF2H5Q6ZYL4 71 aa11.32□□□□□ -0.6
GABPA-202ENST00000400075 C10orf142B7Z368 130 aa11.31□□□□□ -0.6
GABPA-202ENST00000400075 ERASQ7Z444 233 aa11.31□□□□□ -0.6
GABPA-202ENST00000400075 TMEM89A2RUT3 159 aa11.31□□□□□ -0.6
GABPA-202ENST00000400075 A8MWV9 139 aa11.31□□□□□ -0.6
GABPA-202ENST00000400075 DNAL4O96015 105 aa11.31□□□□□ -0.6
GABPA-202ENST00000400075 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
GABPA-202ENST00000400075 A8MXK9 166 aa11.31□□□□□ -0.6
GABPA-202ENST00000400075 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 A6NDX4 124 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 SPART-AS1P0CW21 52 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 SEC11AP67812 179 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 SS18Q15532 418 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 IL17DQ8TAD2 202 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 CSTL1Q9H114 145 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 IGF2BP2-AS1Q96M15 143 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 APRG1Q8IVJ8 170 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 ZNF491Q8N8L2 437 aa11.3□□□□□ -0.6
GABPA-202ENST00000400075 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 DEFB104AQ8WTQ1 72 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 MS4A6AQ9H2W1 248 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 MORN3Q6PF18 240 aaPredicted RBP11.29□□□□□ -0.6
GABPA-202ENST00000400075 H3BRN7 92 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 CGB7P0DN87 165 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 SPXQ9BT56 116 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 ANAPC10Q9UM13 185 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 ACANP16112 2415 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
GABPA-202ENST00000400075 KLK5Q9Y337 293 aaPredicted RBP11.29□□□□□ -0.6
GABPA-202ENST00000400075 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
GABPA-202ENST00000400075 Q6YL49 198 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 NDUFA11Q86Y39 141 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 TMEM256Q8N2U0 113 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 VWC2Q2TAL6 325 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 CCL18P55774 89 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 TRAV13-1A0A0B4J241 112 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 NCR2O95944 276 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 Q86TA4 180 aa11.28□□□□□ -0.6
GABPA-202ENST00000400075 C11orf68Q9H3H3 251 aaKnown RBP11.28□□□□□ -0.6
GABPA-202ENST00000400075 LURAP1LQ8IV03 231 aa11.27□□□□□ -0.6
GABPA-202ENST00000400075 LSM4Q9Y4Z0 139 aaKnown RBP11.27□□□□□ -0.6
GABPA-202ENST00000400075 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
GABPA-202ENST00000400075 BBC3Q96PG8 261 aaPredicted RBP11.27□□□□□ -0.61
GABPA-202ENST00000400075 NCKAP5O14513 1909 aa11.27□□□□□ -0.61
GABPA-202ENST00000400075 NDUFA3O95167 84 aa11.27□□□□□ -0.61
GABPA-202ENST00000400075 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 HBDP02042 147 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 Q6ZSR3 168 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 C4orf3Q8WVX3 66 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 C2orf70A6NJV1 201 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 TEX43Q6ZNM6 134 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 PYGO2Q9BRQ0 406 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 A0A096LPF7 62 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 A0A0J9YY99 117 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 LINC00158P58513 81 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 C11orf71Q6IPW1 123 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 ATP5L2Q7Z4Y8 100 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 CFHR4Q92496 578 aa11.26□□□□□ -0.61
GABPA-202ENST00000400075 FNDC4Q9H6D8 234 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms