RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 NDUFA4L2Q9NRX3 87 aa12.93□□□□□ -0.34
ITSN1-209ENST00000399352 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
ITSN1-209ENST00000399352 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
ITSN1-209ENST00000399352 C1orf147Q96MC9 270 aaPredicted RBP12.93□□□□□ -0.34
ITSN1-209ENST00000399352 PRR25Q96S07 402 aa12.93□□□□□ -0.34
ITSN1-209ENST00000399352 PDCD11Q14690 1871 aaKnown RBP12.93□□□□□ -0.34
ITSN1-209ENST00000399352 SSC4DQ8WTU2 575 aa12.92□□□□□ -0.34
ITSN1-209ENST00000399352 CACNA1BQ00975 2339 aa12.92□□□□□ -0.34
ITSN1-209ENST00000399352 CRLF1O75462 422 aa12.92□□□□□ -0.34
ITSN1-209ENST00000399352 NDUFS7O75251 213 aa12.92□□□□□ -0.34
ITSN1-209ENST00000399352 COL8A2P25067 703 aa12.92□□□□□ -0.34
ITSN1-209ENST00000399352 B3GALT5-AS1P59052 145 aa12.92□□□□□ -0.34
ITSN1-209ENST00000399352 M0R1W7 72 aa12.92□□□□□ -0.34
ITSN1-209ENST00000399352 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
ITSN1-209ENST00000399352 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 CMC4P56277 68 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-209ENST00000399352 FOXL2NBQ6ZUU3 175 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 NTN3O00634 580 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-209ENST00000399352 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 J3QQQ9 107 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 TAL2Q16559 108 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 SH2D6Q7Z4S9 175 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 KLF2Q9Y5W3 355 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-209ENST00000399352 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 RBM3P98179 157 aaKnown RBP12.91□□□□□ -0.34
ITSN1-209ENST00000399352 TCTEX1D4Q5JR98 221 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 KLHL30-AS1Q8NEE0 82 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 SMIM2Q9BVW6 85 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 LTBP4Q8N2S1 1624 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 GAGE6Q13070 117 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 PCP2Q8IVA1 136 aa12.91□□□□□ -0.34
ITSN1-209ENST00000399352 SLX1AQ9BQ83 275 aa12.9□□□□□ -0.34
ITSN1-209ENST00000399352 SAA4P35542 130 aa12.9□□□□□ -0.34
ITSN1-209ENST00000399352 UNQ6494/PRO21346Q6UXR6 183 aa12.9□□□□□ -0.34
ITSN1-209ENST00000399352 UBE2DNLQ8IWF7 75 aa12.9□□□□□ -0.34
ITSN1-209ENST00000399352 K7EN84 100 aa12.9□□□□□ -0.34
ITSN1-209ENST00000399352 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
ITSN1-209ENST00000399352 YLPM1P49750 1951 aaKnown RBP12.9□□□□□ -0.34
ITSN1-209ENST00000399352 TEX48A0A1B0GUV7 120 aa12.9□□□□□ -0.35
ITSN1-209ENST00000399352 ATP6V0E1O15342 81 aa12.9□□□□□ -0.35
ITSN1-209ENST00000399352 RNASE13Q5GAN3 156 aaKnown RBP12.9□□□□□ -0.35
ITSN1-209ENST00000399352 SCRT2Q9NQ03 307 aa12.9□□□□□ -0.35
ITSN1-209ENST00000399352 SCN5AQ14524 2016 aa12.89□□□□□ -0.35
ITSN1-209ENST00000399352 COL11A2P13942 1736 aaPredicted RBP12.89□□□□□ -0.35
ITSN1-209ENST00000399352 COL6A6A6NMZ7 2263 aa12.89□□□□□ -0.35
ITSN1-209ENST00000399352 PRB1P04280 392 aa12.89□□□□□ -0.35
ITSN1-209ENST00000399352 SMIM20Q8N5G0 67 aa12.89□□□□□ -0.35
ITSN1-209ENST00000399352 NBASA2RRP1 2371 aa12.89□□□□□ -0.35
ITSN1-209ENST00000399352 TRAV12-2A0A075B6T6 113 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 SIVA1O15304 175 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 ACACAQ13085 2346 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 SHANK1Q9Y566 2161 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 KIR2DL5BA0A0G2JN68 375 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 KIR2DL5BA0A0G2JPC4 375 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 KIR2DL5AQ8N109 375 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 PSCAO43653 123 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 IGHG3P01860 377 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 ZNF407Q9C0G0 2248 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 RHODO00212 210 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 C8orf86Q6ZUL3 223 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 DEFB125Q8N687 156 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 PTPRDP23468 1912 aa12.88□□□□□ -0.35
ITSN1-209ENST00000399352 LY6DQ14210 128 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 ZNF747Q9BV97 191 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 USF3Q68DE3 2245 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 IGHG4P01861 327 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 TRBV25-1A0A075B6N4 114 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 A0A0G2JNJ9 132 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 TEX36Q5VZQ5 186 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 Q9UFV3 132 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 G3V318 75 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 WT1-ASQ06250 92 aa12.87□□□□□ -0.35
ITSN1-209ENST00000399352 DOCK6Q96HP0 2047 aa12.86□□□□□ -0.35
ITSN1-209ENST00000399352 DSCR8Q96T75 97 aa12.86□□□□□ -0.35
ITSN1-209ENST00000399352 SPANXDQ9BXN6 97 aa12.86□□□□□ -0.35
ITSN1-209ENST00000399352 ZNF561-AS1K7EIQ3 104 aa12.86□□□□□ -0.35
ITSN1-209ENST00000399352 DUX4L9Q6RFH8 374 aaPredicted RBP12.86□□□□□ -0.35
ITSN1-209ENST00000399352 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
ITSN1-209ENST00000399352 TPSG1Q9NRR2 321 aa12.86□□□□□ -0.35
ITSN1-209ENST00000399352 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
ITSN1-209ENST00000399352 FXYD5Q96DB9 178 aa12.86□□□□□ -0.35
ITSN1-209ENST00000399352 CFC1BP0CG36 223 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 CFC1P0CG37 223 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 TDRG1Q3Y452 100 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 IGHV2-70DA0A0C4DH43 119 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.85□□□□□ -0.35
ITSN1-209ENST00000399352 FAM110DQ8TAY7 271 aaPredicted RBP12.85□□□□□ -0.35
ITSN1-209ENST00000399352 BRCA1P38398 1863 aaKnown RBP12.85□□□□□ -0.35
ITSN1-209ENST00000399352 B4DSR2 109 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 FAM120AOSQ5T036 256 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 A0A0G2JMZ2 1700 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 LRRC37AA6NMS7 1700 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 H3BRN7 92 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 LMO1P25800 156 aa12.85□□□□□ -0.35
ITSN1-209ENST00000399352 C17orf82Q86X59 251 aaPredicted RBP12.85□□□□□ -0.35
ITSN1-209ENST00000399352 MDS2Q8NDY4 140 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms