RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MINOS1Q5TGZ0 78 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 EEF1AKMT3Q96AZ1 226 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 MINOS1-NBL1R4GNA1 71 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 C2CD3Q4AC94 2353 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 UBE2E1P51965 193 aa8.15□□□□□ -1.11
CPSF1P1-201ENST00000397477 PLP1P60201 277 aa8.15□□□□□ -1.11
CPSF1P1-201ENST00000397477 NPBQ8NG41 125 aa8.15□□□□□ -1.11
CPSF1P1-201ENST00000397477 TMEM14CQ9P0S9 112 aa8.15□□□□□ -1.11
CPSF1P1-201ENST00000397477 KIR2DL5BA0A0G2JN68 375 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 KIR2DL5BA0A0G2JPC4 375 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 IGLC2P0DOY2 106 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 C11orf71Q6IPW1 123 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 KIR2DL5AQ8N109 375 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 HRNRQ86YZ3 2850 aaPredicted RBP8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 ABCA2Q9BZC7 2435 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 IGHV4-61A0A0C4DH41 118 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 NDUFA3O95167 84 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 IGLL1P15814 213 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 IL17RELQ6ZVW7 336 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 ITLN2Q8WWU7 325 aaPredicted RBP8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 PIMREGQ9BSJ6 248 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 LAMTOR2Q9Y2Q5 125 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 BSNQ9UPA5 3926 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 IGHV4-39P01824 125 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 EGR2P11161 476 aaPredicted RBP8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 BMI1P35226 326 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 CRIP1P50238 77 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 COL5A1-AS1Q5SY13 56 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 SPANXN1Q5VSR9 72 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 SMIM15Q7Z3B0 74 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 KLK15Q9H2R5 256 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 ZNF492Q9P255 531 aa8.14□□□□□ -1.11
CPSF1P1-201ENST00000397477 TRAV9-2A0A087WT02 112 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 ODF3BA8MYP8 253 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 IGLV2-11P01706 119 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 PRSS1P07477 247 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 ARL3P36405 182 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 VAMP3Q15836 100 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 KHDC1LQ5JSQ8 128 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 TTC9CQ8N5M4 171 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 DUX5Q96PT3 197 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 PRR25Q96S07 402 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 HSPB8Q9UJY1 196 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 TRAV41A0A0B4J266 112 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 PRB1P04280 392 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 FAM106AQ4KMX7 169 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 RASL11AQ6T310 242 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 C20orf144Q9BQM9 153 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 CENPVL3A0A0U1RRI6 287 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 M0R381 172 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 IGLC3P0DOY3 106 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 IGHV4-38-2P0DP08 117 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 HTN1P15515 57 aa8.13□□□□□ -1.11
CPSF1P1-201ENST00000397477 SYS1-DBNDD2H3BUS1 97 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 NMUP48645 174 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 ZNF80P51504 273 aaPredicted RBP8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 HIST1H1AQ02539 215 aaPredicted RBP8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 OR10AG1Q8NH19 301 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 PRSS22Q9GZN4 317 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 SIRPDQ9H106 197 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 DOPEY1Q5JWR5 2465 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 M0QZK8 103 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 NUDT3O95989 172 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 TMEM95Q3KNT9 176 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 ORMDL3Q8N138 153 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 OR4C5Q8NGB2 326 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 SRSF8Q9BRL6 282 aaKnown RBP8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 A0A1B0GXF2 115 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 WI2-2373I1.2A0A1W2PRP0 233 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 LMO4P61968 165 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 BLCAPP62952 87 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 DTX2Q86UW9 622 aa8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 WIPF2Q8TF74 440 aaPredicted RBP8.12□□□□□ -1.11
CPSF1P1-201ENST00000397477 MTORP42345 2549 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 RNASE8Q8TDE3 154 aaKnown RBP8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 TRBV12-3P01733 135 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 MGPP08493 103 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 ESDP10768 282 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 PAX8Q06710 450 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 LOXL1Q08397 574 aaPredicted RBP8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 SPATA12Q7Z6I5 190 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 STPG4Q8N801 248 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 CACNG7P62955 275 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 TM4SF20Q53R12 229 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 PRSS57Q6UWY2 283 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 LYPD1Q8N2G4 141 aa8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 FAM110DQ8TAY7 271 aaPredicted RBP8.11□□□□□ -1.11
CPSF1P1-201ENST00000397477 TSPOP30536 169 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 CT83Q5H943 113 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 CFAP46Q8IYW2 2715 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 IGHV4-30-2A0A087WSY4 118 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 TRAV26-2A0A0B4J265 109 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 OOSP1A8MZH6 123 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 F6UB75 175 aa8.1□□□□□ -1.11
CPSF1P1-201ENST00000397477 HAX1O00165 279 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms